ggKbase home page

S1-16-all-fractions_k255_4951531_4

Organism: S1-16-all-fractions_metab_10

partial RP 21 / 55 MC: 4 BSCG 26 / 51 MC: 4 ASCG 11 / 38 MC: 3
Location: 4267..5619

Top 3 Functional Annotations

Value Algorithm Source
GGDEF: diguanylate cyclase (GGDEF) domain similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 454.0
  • Bit_score: 228
  • Evalue 2.80e-57
GGDEF: diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:AHY46009.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.3
  • Coverage: 454.0
  • Bit_score: 228
  • Evalue 1.40e-56
Ggdef domain/hd domain protein id=4087796 bin=GWC2_Deltaproteobacteria_42_51 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 36.7
  • Coverage: 297.0
  • Bit_score: 196
  • Evalue 3.20e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubrobacter radiotolerans → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1353
ATGACCAGCGGACGATTCCACGATCGGGAGGTGAGGGGGCGCGGCCGACCGGCGAGCGACGCGGACTCCGTGCTCGGCGACCCCGACGCGGCCGCGGAGCACTACCGCGCGCTGCGGGAGCGCTGGGACGAGCAGGCGGCCGCGCTCGCCGCGGCGGAGGAGCGCGCCGCGCGCCTCGAGGCCGTGCTCGCGCACGAGCGCGCGCGCGTGAGGAGGCAGCGCGACGAAGCGCGCCGGGAGCGGGAGCGCACGGCGAAGCTCCGCGATGCGGTGAAGTCGTTCCACGTCTCGCTCTTCCGCGGCGGCCTCCACGCGCAGGTGCTGCACGCCTGCCTCTCCATCACCGGCGCCAGACGCGGCGTCTACGTGACCGCGAAGGGCCCGAGCGGCAGGCTCCGCGTGCGCGCGGCCGCGGGCGTGGACGGCTACCCGAAGCGTCGCCCGTCGCCGTACTTCGAGGCTCTCTGCCGCCGGGCGATCGCCGAGCGGCGGACGGCCGTGGTCAACGGGCCGGCGCAGGCGCCCGGCGAGCCAGCTCCCGGCGAGGACGTCGAGCGGTTCGGCAACTATCTCGTCGCCCCCGTCGTCGTCCTGAACGACCTCGACGGCGTCGTGATCCTGGCGGACAAGATCGGCGACTTCGACGAGGACGACGTCGAGACGCTGCTGAGCGTCGGCGACGAGGCGGCGGTCGCGGAGGAGAACGTGCGGCAGGAGCACGATCTCCAGCACGCCTACCTCGCCGCCGTCAGCATGCTCGCGGACGCCGTGGAGGCCAAGGACCCCTACACGCACGGCCACTGCGAGGAGGTCTCGCGCTACGCCCGCATCACCGCGCGACGCCTCGGCCTCGCCGAGCACGAGGTGAGCGTCACCTGCTACGCCGCGCTGCTGCACGACGTGGGGAAGATCGCGGTGAGCGACGGGGTGCTCCACAAGGCGGGGCCGCTGCTGCCCGAGGAGATGGCGCTCGTGCGCTCGCACGTGCGCGTGGGCCACGACCTCCTCCGCGGCGTCCCCGGCCTCGCGTCCGTGGCGGACGTCGTCCTGCACCATCACGAGCGCTGGGACGGCGACGGCTACCCCGACGCCCTGGTCGGCGAGCGGATCCCGGTCGCGGCGCGCATCGTCGCCGTAGTGGACTCGTACTGCGCCATGCGCGACCGCCGCCCCTACAAGGATCCGCTGGGCGACGCCGCGGCGCGCGAGGAGCTCCGGCGCTGCGCCGGCAGGCAGTTCGACCCGGCGATCGTGGAGGCGTTCCTCGCCGCGCTCGACATGCCCGAGTCGGACGACGACGACGACGACGACTACGCCGAGTGCGGCCTGCTGCCGGTCTTCCTGCCGACCTGA
PROTEIN sequence
Length: 451
MTSGRFHDREVRGRGRPASDADSVLGDPDAAAEHYRALRERWDEQAAALAAAEERAARLEAVLAHERARVRRQRDEARRERERTAKLRDAVKSFHVSLFRGGLHAQVLHACLSITGARRGVYVTAKGPSGRLRVRAAAGVDGYPKRRPSPYFEALCRRAIAERRTAVVNGPAQAPGEPAPGEDVERFGNYLVAPVVVLNDLDGVVILADKIGDFDEDDVETLLSVGDEAAVAEENVRQEHDLQHAYLAAVSMLADAVEAKDPYTHGHCEEVSRYARITARRLGLAEHEVSVTCYAALLHDVGKIAVSDGVLHKAGPLLPEEMALVRSHVRVGHDLLRGVPGLASVADVVLHHHERWDGDGYPDALVGERIPVAARIVAVVDSYCAMRDRRPYKDPLGDAAAREELRRCAGRQFDPAIVEAFLAALDMPESDDDDDDDYAECGLLPVFLPT*