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S1-16-all-fractions_k255_6941688_4

Organism: S1-16-all-fractions_metab_10

partial RP 21 / 55 MC: 4 BSCG 26 / 51 MC: 4 ASCG 11 / 38 MC: 3
Location: comp(3280..4155)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 286.0
  • Bit_score: 326
  • Evalue 3.20e-86
tRNA pseudouridine synthase B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8P0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 297.0
  • Bit_score: 278
  • Evalue 4.10e-72
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 286.0
  • Bit_score: 326
  • Evalue 6.40e-87

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 876
ATGCGGGGCCCACGCCCTGAGGCTGCGGCCGGCGGCCTGCTGCTCGTCGACAAGCCTGCGGGCCTCACCTCGCACGACGTGGTGGCCGTCGCGCGCCGCGCGCTCCGCGAGCGCCGCGTCGGCCACGGCGGCACGCTCGACCCCTTCGCCACGGGCCTCCTGGTTCTCCTCGTGGGCCGCGCCACGCGGCTCCTGCCCTATCTGAGCGGGGAGCCCAAGGTGTACGCCGCCACCATTCGCTTCGGGTCCGAGACGACCACGGACGACCCTTCTGGCGAGGCGACCGTCGCGGCGCCTCCCCCGACCCTGGCCGCCGTGCGCGAGGCGCTGCCGGCGCTCACCGGCGCGCTGCTGCAGGTGCCGCCGGCGTACTCCGCGAAGAAGGTGGCGGGGGAGCGTGCCTACGATGCGGCGCGCCGCGGTGCCCCGTTGGCGCTCCCGCCGGTGCCGGTCGTCGTGCACGGCTGGGAGCTGGGAGAGCTGCGCGACGACGAGTTGGCGGTCACCGTGACGTGCAGCGGCGGGACGTACGTCCGCGCCCTCGCTCGCGACCTGGGGCGCGCTGCGGGCAGCGCGGCCCACCTCACGCGGCTGCGGCGGCTGCGCAGTGGGCCCTTCGACGTCGGCGACGCCTTGCCCCTCGATGCCCTGGAGCGAGGCGAGGCAGAGCTACGCCCGCCGCTCGACGCCCTGGGCACCCTTCCGGTGGACGCCCTGGACGCGAGTGCCGTGCAGCGACTCCTCCGCGGCATCCCCGTGCCCGCGTCGGCCGCCGGGTCGTGGGGCGCCCTCGTGGACGAGTCGCGGGCGCTCGTGGCCGTGGCGGAGCGGGTGGGCGACGCCTGGCAGCCCCGCGTCGTGCTTCGCGATGCCTGA
PROTEIN sequence
Length: 292
MRGPRPEAAAGGLLLVDKPAGLTSHDVVAVARRALRERRVGHGGTLDPFATGLLVLLVGRATRLLPYLSGEPKVYAATIRFGSETTTDDPSGEATVAAPPPTLAAVREALPALTGALLQVPPAYSAKKVAGERAYDAARRGAPLALPPVPVVVHGWELGELRDDELAVTVTCSGGTYVRALARDLGRAAGSAAHLTRLRRLRSGPFDVGDALPLDALERGEAELRPPLDALGTLPVDALDASAVQRLLRGIPVPASAAGSWGALVDESRALVAVAERVGDAWQPRVVLRDA*