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S1-18-all-fractions_k255_649638_3

Organism: S1-18-all-fractions_metab_conc_39

partial RP 39 / 55 MC: 4 BSCG 38 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(1450..2667)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2NI53_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 416.0
  • Bit_score: 488
  • Evalue 4.80e-135
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EMD21819.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 416.0
  • Bit_score: 488
  • Evalue 6.70e-135
putative ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 408.0
  • Bit_score: 482
  • Evalue 7.40e-134

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Taxonomy

Amycolatopsis azurea → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
GTGTCAGCCCCTACACCAGAGCTCGAGCACCTGCTGCGCACCGAGGCGCCGCAGGTGCTCGGTGCATTGGTGCGCCGATTCGGCCACTTCGACATCGCCGAAGACGCGGTCCAAGACGCACTGCTCGCGGCCGCGCAGCAGTGGCCGACCCGCGGCATTCCCGAGCATCCCCGTGGCTGGCTGATCCGGGTGGGCTACCGCCGGATGGTCGACCAACTTCGCACCGACCAGCTTCGGCAGCGTCGCGAATTCCAGCTGGCCAGCCAGCCGACGCCGGCGTCGACCGACGAACCGGCCGCAGACGATAGCCTGACGCTTCTGTTCTTGTGCTGTCATCCGATCCTCAGCCCGGTCTCCCAGGTCGCACTGACGCTGCGAGCCGTTGGCGGGCTCACTACTGCTGAGATCGCCCACGCCTATGGAGTCACTGAAGTCGCTATGGGCCAGCGGATCAGCCGTGCCAAGCAACAGATCAGGTCCGCTGGCGGACGGTTTGTCCTGCCATCGGCGGAGGACATGGAGCACCGGCTGACCACCGTGCTGCAGGTGCTGTATCTGATTTTCAACGAAGGCTATGCGGTGACAGCGGGCGAGCAGCTGCACCGGGTTGACCTGACCACCGAAGCGATCCGGCTGACTCGGATGCTCCACGGGCTGCTGCCCGATGAGCCGGAGGTAGCTGGGCTGCTGGCCCTGATGCTGCTCAACGACGCGCGCCGCCCCGCCCGCTCCACCGAGGCTGGGGACCTGATCACCATGGAACATCAGCAGCGTGACCTCTGGGACAAGGCCTTCACCGCCGAGGGAACCGCTCTGATCACCGCCGCGATGCGCCGGCGACAGGTGGGGGCTTACCAGCTGCAAGCCGCTATCGCCGCCTTGCACAATGGGGCGCCCAGTTACGCCGAAACCGATTGGCCGCAGATCGCCGCCCTATACGCGTGGTTGGAGCAGCTCACCCCGACCCCGCCCGTCCGGCTCAGCAGGGCCGTCGCGGTCGCGATGGCGTACGGCCCCCGGCGCGGCATCGTGCTGCTAGACAGCCTGGCCGACGACCCGCTCATCCGGCAGCGGGAGCGAGCCGTCCGCGCGCACCTGCTGGAACTCGACGGCGACACCCGACAGGCCGCCGAACTCTTCCGAGAGGCGGCCACCCTTACCGATAACCTCGCTGAGCGCCGGTATCTGGAGGGGCGAGCCAAGCAGCTCGAATCGTGA
PROTEIN sequence
Length: 406
VSAPTPELEHLLRTEAPQVLGALVRRFGHFDIAEDAVQDALLAAAQQWPTRGIPEHPRGWLIRVGYRRMVDQLRTDQLRQRREFQLASQPTPASTDEPAADDSLTLLFLCCHPILSPVSQVALTLRAVGGLTTAEIAHAYGVTEVAMGQRISRAKQQIRSAGGRFVLPSAEDMEHRLTTVLQVLYLIFNEGYAVTAGEQLHRVDLTTEAIRLTRMLHGLLPDEPEVAGLLALMLLNDARRPARSTEAGDLITMEHQQRDLWDKAFTAEGTALITAAMRRRQVGAYQLQAAIAALHNGAPSYAETDWPQIAALYAWLEQLTPTPPVRLSRAVAVAMAYGPRRGIVLLDSLADDPLIRQRERAVRAHLLELDGDTRQAAELFREAATLTDNLAERRYLEGRAKQLES*