ggKbase home page

S1-18-all-fractions_k255_258130_4

Organism: S1-18-all-fractions_metab_42

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: 2976..5906

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor, plug id=12557849 bin=CNBR_ACIDO species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 32.3
  • Coverage: 1022.0
  • Bit_score: 456
  • Evalue 6.30e-125
TonB dependent receptor protein similarity KEGG
DB: KEGG
  • Identity: 24.1
  • Coverage: 1018.0
  • Bit_score: 203
  • Evalue 1.60e-49
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 987.0
  • Bit_score: 902
  • Evalue 4.70e-259

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 2931
ATGACACAGAGGCAATGGATGTCGGCTGCTGCGGTGCTGATCGCGCTGACGGTGGGCCCGCACGCGGTCTTTGCACAAGGGGTGCAGACGGGCATCATCACCGGCACGGTCACGTCCGAAGACGGGCTGTCCCTGCCGGGTGCGACGGTGACGGTGACCGCGCCGACGCTGCAGGGTGCTCGGTCGGCTGTCGCCGACGTCAACGGCAACTATGTGATCCGCGGGCTGCCGCCCGGCGAGTACCAGGTCGCCATCGAGATGAGCGGGATGAGGCCGCGTACGGAGCAGACGGTCGTTGCGCTCGGCCGCACCACTACGGTGGATGCCCGCCTCTCGCTCGCCGGCGTCGCCGAGGCCATCGAGGTCGTGGCGCAGGCGTCGCCCGTCGTCGAGAACCCGGTCGTCGGCGCCAACTACCGCAAGGAGGAGATCGACCGTCTGCCGGCCGGACGCACGCCCCAGGAGATCGCGGAGCTCGCCCCCGGGCTGACGGACAACACGCCGAACACGGGGCAGCTGTCGATCTCGGGTGGCTTCGCGTTCGACAACGTGTTCCTGATCGACGGCGTCGATGTGAACGACAACTTCTTCGCGGACGTGACTGATGTTTTCATCGAGGATGCCGTGGACGAGACGCAAGTGCTCACCTCCGGCATCTCGGCCGAGTACGGCCGGTTCTCGGGCGGCGTCGTCAATCTCATCACCAAGCGCGGCGGCAACCAGTTCTCGGGCAGCTTCCGCACGAACTTCTCGAATCCGTCCTGGACCGACGAGACACCGTTCGAGACGACACCGCGGCGTGACGATCTTCAGCAGGTGTACGAAGGCACTCTCGGGGGCCCCATCCTGCGGGACAAGGTCTGGTTCTTCGCCGCAGGACGCCGGGAGGAGAGCCAGACCCCGTACAACTTCCGCATCACGCAGGTGCCTGGCTCCGCCGGCGTGAAGGACACGCGGATCGAAGGCAAGGTCACCGCGACGCCGTTCGCCAACCACACGTTCCAGGGCAGCTTCGTCGACAACGACACGCGCCAGACCGGAGTCCGGGGCATCAACGACGCCGCCATCGATCCGCGCGTGCTCTACACCCGGCGCCTCCCGCAGCGCCTGGGCGTCGTCAACTGGAACGGCGTGCTGACGTCCAAGCTGTTCGCCACCGCGCAGTGGTCGCAGAAGAAATTCGCGTTCAAGGACAACGGCGGCCGCGGCACGGCCCTGCGCGACTCCCCCTTCCGCACCATCGGCGGCGGCGGTATTCCGCAGAGCCTGCTGTACAACGCGCCGTACTTCGACTTCAATGATCCGGAGGATCGCGACAACCAGCAGCTGACCGGCAGCCTGTCGTACTTCCTCTCGACGAGCCGCCTGGGCAGCCACGATCTGAAGGGCGGTATCGAAAACTTCACGAGCACCAACACCGGCGGCAACTCGCAGAGCTCGACCGGATATGTCTACTGGTCGAACTACGTCCAGGACGCCGCGGGCCTGCCGCTCTTCGACGCCGACGGTACACTCACACCGATCTTCGAGCCTGGCGGCTCCTGGCTGTTCAACTGGATTGCCAGCCGGGACGCCGAGATCAACATCCGCACCGCATCGTTCTACGTGCAGGACCGCTGGGCGGCCTCGAAGCACCTCACCTTTGACCTCGGCATGCGGTACGAGCAGGTGCGCAGCGAGACGACGGACAACATCGTCGGAGCGGACACCAACACACTGGTGCCGCGGCTGGCCGCCACGTGGGACATCCGGGGCGACGGCCGCCTGGTGGCCCAGGGCACGTGGGGTCATTACTCGGGCCGCTACAGCGAGGCCCAGTTCGCGGGCAACAGCGACGTCGGCAACCCGAGCCTGCTCTGGTACGTGTACACGGGGCCGGCGGGTGCGGGTCTCGACTTCGCACCCGGTCTTGACCCGGCGAACTACACCGAGATCGCGCTCGGGAACTTCCCGACGGCAAACGTGTTTTTCGATCCGGATCTCTCATCGGCGGTGAATCGTGAAGTCACCGCATCGCTCGGTGCCGAGGTGGGCTCGCGTGGGTACGTGAAGGCCACCTGGGTGCGGCGGAAGACCAACAACATCATCGACGATTTCATCGACACGACGACCGGGCAGACACATGTCGTCAGGAATGGAACCGATTTCGGCACCTTCGACAACTCTCTCTACAAGAACGCCGATGACTCGCTGTTCCGGGAATACCAGGCGCTGGTGTTCCAGGGGCGCTATCGTCTGTCGAACCGATGGTCGCTGAACGCCCACTACACGACGCAGCTGCGCAACAACGGCAACTTCGAAGGAGAGGCTGCGAACCAGCCGGGCATCCCCTCGCTCTACGGCGATTACCCAGAGGTGTTCACCGCGTCCCGTAACTTCCCCGAGGGCCGACTGGCGTCGTTCCAGCGGCACAAGGTGCGCGTGTGGTCGATCTACAACCTGGGCCTCGGGCGTCTGGGCGGCCTCGACGTGTCGGGCCTGTGGCGCTACAACTCGGCTCTGTCCTACAGTCTGGTGGCCGAGGGCGTGCCGCTCAGCGACATCCAGATGGCGCGGGCGGAAGCGGCGGGGTATGCCAGCGCACCCGGCGGCGGCGAGCAGGACCTGTACTTCGCCGAGCGGGGCACGGAGAGCTTCAAGGGGTACGGGCTGTTCGATGTGAGCCTGAACTACAGCATCCCTGTGTGGAAATCGGTCCGTCCGTACATCAAGTTCGACGCGCTGAACGTCTTCAACAACCAGAAGTTGATCGGCTTCGATACCACGATCGATCCGAACTACGACGGTCCGGTCGACGCGCTCGGACTGCCGCTGGAGTTCGTGCGCGGGCCGAACTTCGGCAAGGCGGAACGCAATCAGGACTACCCGGGCTGGCGCACGGGCCAGAACGGCGGCCGCACGTTCCTCGTTGCGGCGGGTTTCCGGTTCTGA
PROTEIN sequence
Length: 977
MTQRQWMSAAAVLIALTVGPHAVFAQGVQTGIITGTVTSEDGLSLPGATVTVTAPTLQGARSAVADVNGNYVIRGLPPGEYQVAIEMSGMRPRTEQTVVALGRTTTVDARLSLAGVAEAIEVVAQASPVVENPVVGANYRKEEIDRLPAGRTPQEIAELAPGLTDNTPNTGQLSISGGFAFDNVFLIDGVDVNDNFFADVTDVFIEDAVDETQVLTSGISAEYGRFSGGVVNLITKRGGNQFSGSFRTNFSNPSWTDETPFETTPRRDDLQQVYEGTLGGPILRDKVWFFAAGRREESQTPYNFRITQVPGSAGVKDTRIEGKVTATPFANHTFQGSFVDNDTRQTGVRGINDAAIDPRVLYTRRLPQRLGVVNWNGVLTSKLFATAQWSQKKFAFKDNGGRGTALRDSPFRTIGGGGIPQSLLYNAPYFDFNDPEDRDNQQLTGSLSYFLSTSRLGSHDLKGGIENFTSTNTGGNSQSSTGYVYWSNYVQDAAGLPLFDADGTLTPIFEPGGSWLFNWIASRDAEINIRTASFYVQDRWAASKHLTFDLGMRYEQVRSETTDNIVGADTNTLVPRLAATWDIRGDGRLVAQGTWGHYSGRYSEAQFAGNSDVGNPSLLWYVYTGPAGAGLDFAPGLDPANYTEIALGNFPTANVFFDPDLSSAVNREVTASLGAEVGSRGYVKATWVRRKTNNIIDDFIDTTTGQTHVVRNGTDFGTFDNSLYKNADDSLFREYQALVFQGRYRLSNRWSLNAHYTTQLRNNGNFEGEAANQPGIPSLYGDYPEVFTASRNFPEGRLASFQRHKVRVWSIYNLGLGRLGGLDVSGLWRYNSALSYSLVAEGVPLSDIQMARAEAAGYASAPGGGEQDLYFAERGTESFKGYGLFDVSLNYSIPVWKSVRPYIKFDALNVFNNQKLIGFDTTIDPNYDGPVDALGLPLEFVRGPNFGKAERNQDYPGWRTGQNGGRTFLVAAGFRF*