ggKbase home page

S1-18-all-fractions_k255_5884576_4

Organism: S1-18-all-fractions_metab_42

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: comp(1971..3782)

Top 3 Functional Annotations

Value Algorithm Source
phospholipid-lipopolysaccharide ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] id=12556944 bin=CNBR_ACIDO species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 619.0
  • Bit_score: 678
  • Evalue 3.70e-192
phospholipid-lipopolysaccharide ABC transporter similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 578.0
  • Bit_score: 531
  • Evalue 2.70e-148
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 576.0
  • Bit_score: 814
  • Evalue 7.90e-233

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1812
GTGAACGCGCTCCTCCGACTGCTTCGCTACGCGAGACCTTATCGCCTGCGCTTCGGCTGGGCGCTTGCGGCGATGCTCGTGTACGCGGCCGCGTCGGCCGCGCTCGCCTACCTGATCAAGGACATTCTCGACAAGGTCCTGCCGCACGGGCAGGACCTGTCGCTCGTCGCCGCGCTCATCATCGCGTTCTACATCTTCAAGGGGCTCGGCTCCTACTTCTCCGCCTACCTGATGGCCGACATCGGGCAGCGGGTCGTGCGCGACCTCCGCAACCTGCTGCAACGGCACATTCTTGGACAATCGGCCAGCTTCTTCGCGCACCGGGCGACGGGGCAGCTGCTCTCGCGGGTCACGAACGACGTCGGCCAGGTGCAGCATGCCGTATCCGAGACCATCGGCGATCTCCTGCAGGAGTCGCTCGCGCTCGTCGGGTACGCCGCCCTGCTGTTCTATTACGATGCCGGCCTCGCGCTCGTGTGCCTCACGGGCGCTCCGCTCATCGTCTACCCGCTGGCGCAACTGGGCAAGCGGCTGCGCAGGACCACGCGCCGCAGTCAGGAAGCGCTGGAGCATCTGTCGCACGTCAGCACCGAGGCCTTCACGGGCCACCGCATTGTCAAGGCATTCACGGCGGAGGAGCGCGAGGCGGAGAAGTTCGAAGCGGCATCCCAGCGGCTGTACCGCACGAACATGATCGTCACGCGCATCGTGTCGATCCTGCCGCCGCTGATGGAGTTGCTGGGCGGGATGGCCATCGCGGTCGCTCTCTGGTACGGCAGCCGCGCCATTGCCGCCGGGCGGCTGACTCCGGGAGAGTTCACGTCGTTCGTGGCGGCGCTCCTGCTGATGTACGGCCCGGTGAAGAAACTGAGCCGGGTAAACGCCAGCCTTCAGCAGGCGATCGCCGCCGCGGAGCGCATCTTCGAGGTGCTCGACGAGCACACGGAAGTACGGGAGCGACCCGGCGCGCCGGCACTCGCGCCGTTCTCAAGGGAGATCGAATTCCGCGACGTGGTGTTCGCCTATGACGACGCCAGCACGCGCCCGATCCTGCGCAATCTGAGCCTGACGGTCCGGGCGGGCGAGATGGTCGCCATCGTCGGCCGCAGCGGCGCGGGAAAGACCACGCTGGTCAACCTGCTGCCCCGGTTCTACGACGTGACGTCGGGGATGATCCTTTTCGATGAGGTGGACATCCGGGACGTGACGATCGCGTCCCTGCGCGCCCAGATCGGAATCGTGACGCAGGACACCGTGCTCTTCGATGACACCATTGCGCGCAACATCGCGTACGGCGTCCCGGCCGCCACCCGCCAGGAGATCGAGGCGGCCGCGCGCGCGGCGCACGCGCACGACTTCGTCATGGGCCAGCCGCACCGGTACGACACGGAGATCGGGGAGCGTGGCCAGCGGCTCTCGGGCGGGCAGCGCCAGCGGATTGCGATCGCGCGGGCGATCCTGAAGAACTCGCCGATCCTCATCCTCGATGAGGCGACCTCCGCGCTCGACTCCGAGTCGGAGCTGCTGGTGCAGGACGCGCTGGCGAACCTGATGATGAACCGCACGTCGTTCGTCATCGCGCACCGGCTCTCGACGATCCGTCGAGCCGACGCCATCGTCGTCATGGAGCGTGGCCGCGTTGTCGAGGTGGGGCGCCACGACGAGCTCGTGACACGTCCCCAGGGGGTGTACGCCCGCCTGCACTCGATGCAGTTGCTGGAAGGGCGGCGCGCGCCGGCGGCAGCGCCGCTGCTGGTCGACACGGGAGAAGGCCGCGTGAGCGTCGCGGTAGGCGAGCGCCAGGACGATTGA
PROTEIN sequence
Length: 604
VNALLRLLRYARPYRLRFGWALAAMLVYAAASAALAYLIKDILDKVLPHGQDLSLVAALIIAFYIFKGLGSYFSAYLMADIGQRVVRDLRNLLQRHILGQSASFFAHRATGQLLSRVTNDVGQVQHAVSETIGDLLQESLALVGYAALLFYYDAGLALVCLTGAPLIVYPLAQLGKRLRRTTRRSQEALEHLSHVSTEAFTGHRIVKAFTAEEREAEKFEAASQRLYRTNMIVTRIVSILPPLMELLGGMAIAVALWYGSRAIAAGRLTPGEFTSFVAALLLMYGPVKKLSRVNASLQQAIAAAERIFEVLDEHTEVRERPGAPALAPFSREIEFRDVVFAYDDASTRPILRNLSLTVRAGEMVAIVGRSGAGKTTLVNLLPRFYDVTSGMILFDEVDIRDVTIASLRAQIGIVTQDTVLFDDTIARNIAYGVPAATRQEIEAAARAAHAHDFVMGQPHRYDTEIGERGQRLSGGQRQRIAIARAILKNSPILILDEATSALDSESELLVQDALANLMMNRTSFVIAHRLSTIRRADAIVVMERGRVVEVGRHDELVTRPQGVYARLHSMQLLEGRRAPAAAPLLVDTGEGRVSVAVGERQDD*