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S1-18-all-fractions_k255_6123839_1

Organism: S1-18-all-fractions_metab_42

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: 1..543

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB78_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 174.0
  • Bit_score: 144
  • Evalue 7.50e-32
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 174.0
  • Bit_score: 144
  • Evalue 2.10e-32
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 176.0
  • Bit_score: 156
  • Evalue 2.70e-35

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Taxonomy

R_Acidobacteria_68_18 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 543
CATCAGCCCGCAGCGCGCGAGATCGTCCGCCGCTACCAGCGCCCGGTCTTCAACCTCATCGTTCGCATGGTGCAGGATGCCGGGACCGCCGAAGACCTGGCGCAGGAAGCGTTTGTGAAGGTCTTCCGGAGCCTGCAGACATTCGATGTGCGCCTGCGCTTCGCCGCCTGGATTCTCAAAATCGCACACAACACCACGCTCGACTACCTGCGCCGTCATCGGCCGCACCTGGTGCCGCTCGATGCGCCCGTACACGGCGAGGAGCGCACGCTCGCCGATCAGCTTCCAAATCCCGCTGCCGTGTCACCCGAGCGATCGGTGGAGCACCAGCAATTGCGCGCGGCGCTGGACGCGGCAATCGATCGCCTCAGGCCCGAATACCGGCGTGTGGTCGTGCTGCGGTATCAAGAGGACCTCGACTACGCCGAGATCGCCGAGATCACGGGCACGCCACTCGGCACGGTCAAGACGTTCCTCCATCGCGCGCGGCAGGCGTTGGCCCGCGAGCTGCGCAAGGCGGGCTGGGGCCCTGCCGGTCGTTGA
PROTEIN sequence
Length: 181
HQPAAREIVRRYQRPVFNLIVRMVQDAGTAEDLAQEAFVKVFRSLQTFDVRLRFAAWILKIAHNTTLDYLRRHRPHLVPLDAPVHGEERTLADQLPNPAAVSPERSVEHQQLRAALDAAIDRLRPEYRRVVVLRYQEDLDYAEIAEITGTPLGTVKTFLHRARQALARELRKAGWGPAGR*