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S1-18-all-fractions_k255_1930804_3

Organism: S1-18-all-fractions_metab_42

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: comp(1556..2152)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D563_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 167.0
  • Bit_score: 141
  • Evalue 9.10e-31
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 194.0
  • Bit_score: 144
  • Evalue 1.80e-32
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 194.0
  • Bit_score: 144
  • Evalue 8.90e-32

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Taxonomy

Collimonas arenae → Collimonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGAGTAACGGATTGTGTCGACCGGTGTCGGCCTCACTCGCCGGTGACAGTTTTGACAACGTGGTCCTGCCGCATCTCGATGCTGCGTGCCGGCTGGCGCGACACCTGATGCGCAATCAGCACGATGCGGAAGACGCCGTTCAGGAGGCGTCGCTGCGGGCCTTCCGATACTTCCGCACTTTCAGCGGCGGGAACGGGCGTGCATGGTTTCTGAGGATCGTTCGCAACACCTGTCACGGCTGGCGCGGTCACAGCGTGCGGGTAGCCACCGAATCCTTCGACGAGGCGCAGCACAGCCAGGCGCAGCCGGCGAACGATCCAGAAATGCTGGCGCTGCGGAGCGATGACGTCGTGCTGATCGAGCAGGCGCTGCGGCATGTGCCGGATCGGGGTCGTGCGCTGCTGATGCTCCGCGAGTTCGATGGGCTGTCCTACCGTGAGCTCTCCCAGGCGATGGGCATGCCGATCGGCACGGTGATGTCCACCCTGTCGCGCGCCCGCCGGGTGTTCCGGGAGGCGCTGGAGAGCCAGACACGGCGTGCGATGCCGGTTGAAACCGGGCGAGAGCGCGAGCGCGAGCCGGGCGCGCTGGTGTGA
PROTEIN sequence
Length: 199
MSNGLCRPVSASLAGDSFDNVVLPHLDAACRLARHLMRNQHDAEDAVQEASLRAFRYFRTFSGGNGRAWFLRIVRNTCHGWRGHSVRVATESFDEAQHSQAQPANDPEMLALRSDDVVLIEQALRHVPDRGRALLMLREFDGLSYRELSQAMGMPIGTVMSTLSRARRVFREALESQTRRAMPVETGREREREPGALV*