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S3-16-all-fractions_k255_4123892_5

Organism: S3-16-all-fractions_metab_conc_63

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 MC: 6 ASCG 14 / 38 MC: 1
Location: 2305..3789

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKY0_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 498.0
  • Bit_score: 798
  • Evalue 3.40e-228
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 498.0
  • Bit_score: 798
  • Evalue 9.70e-229
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 498.0
  • Bit_score: 798
  • Evalue 4.80e-228

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Taxonomy

Nocardioides sp. JS614 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1485
GTGTCTTCACACGCACGCAAGTTGCTCCCCGCGGAGGTGCTGACGCATCCCTCCATCACGGCCCTGGTCGCCAGCGCCACCCCCCACGGCACCGTGTCCCCCGTTGACGTACGACGGGCCAGTGACGAGGCGGGGGTCGAGCCCAAGCACCTGAAGGCACTCCTGGTGCACCTCAGCGGCCTCGGCATCTCCGTCCAGATCGATGCCACCGGGCTCCGGGCGGTCGCCGCCACCAGCAAGCGCGCGGCCACGTCGTCGGCGGCCAAGAAGGCCCCGGCGAAGAAGGCGGCCACGGCCAAGACGACCGAGCCGGCGAAGAAGGCGGCGCCCGCCAAGAAGGTCGCGGCGAAGACGACCTCGGGCGCGAACGCCTCGGACGACGTGGTCGACCTCGGCGCCGTCGAGCCCGTGGTGATCGGCCCGGACGGCAAGAAGATCCTGCCCGACATCCCGGACGAGGAGTTCGAGAAGGACGTCGCCAAGGACCCCTCGATCAAGGAGGACGAGAAGCAGGCCTTCACCGTCTCCGCGGCCGACGAGACCGACGAGCCCGAGCAGCAGGTCATGGTGGCCGGCGCCACCGCCGACCCGGTCAAGGACTACCTCAAGCAGATCGGCAAGGTCCCGCTCCTCAACGCCGAGATGGAGGTCGAGCTGGCCAAGCGCATCGAGGCCGGCCTGTTCTCCGAGGAGAAGCTCGCCAAGGGCGGCCGGATCAGCGCAAAGATGCTCGAGGAGTACGAGTGGATCTCCCAGGACGGCCGCCGCGCCAAGAACCACCTCCTGGAGGCCAACCTGCGGCTCGTGGTCTCCCTGGCCAAGCGCTACACCGGTCGCGGCATGCTCTTCCTCGACCTGATCCAGGAGGGCAACCTCGGCCTGATCCGCGCGGTCGAGAAGTTCGACTACACCAAGGGCTACAAGTTCTCGACGTACGCCACGTGGTGGATCCGTCAGGCGATCACCCGTGCCATGGCCGACCAGGCGCGCACCATCCGCATCCCGGTCCACATGGTCGAGGTCATCAACAAGCTCGCCCGCGTGCAGCGCCAGATGCTCCAGGACCTGGGTCGCGAGCCCACGCCGGAGGAGCTGGCCAAGGAGCTCGACATGACCCCGGAGAAGGTCATCGAGGTCCAGAAGTACGGCCGCGAGCCCATCTCGCTGCACACGCCCCTGGGCGAGGACGGCGACTCCGAGTTCGGTGACCTCATCGAGGACTCCGAGGCGATCGTCCCGGCGGACGCGGTGTCGTTCACGCTGCTCCAGGAGCAGCTGCACGCCGTGCTCGACACCCTCTCGGAGCGCGAGGCGGGCGTGGTGTCCATGCGCTTCGGCCTCACCGACGGCCAGCCGAAGACCCTCGACGAGATCGGCAAGGTCTACGGCGTGACCCGCGAGCGGATCCGCCAGATCGAGTCGAAGACGATGTCCAAGCTGCGGCACCCCAGCCGGTCGCAGGTCCTGCGCGACTACCTGGACTGA
PROTEIN sequence
Length: 495
VSSHARKLLPAEVLTHPSITALVASATPHGTVSPVDVRRASDEAGVEPKHLKALLVHLSGLGISVQIDATGLRAVAATSKRAATSSAAKKAPAKKAATAKTTEPAKKAAPAKKVAAKTTSGANASDDVVDLGAVEPVVIGPDGKKILPDIPDEEFEKDVAKDPSIKEDEKQAFTVSAADETDEPEQQVMVAGATADPVKDYLKQIGKVPLLNAEMEVELAKRIEAGLFSEEKLAKGGRISAKMLEEYEWISQDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAIVPADAVSFTLLQEQLHAVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD*