ggKbase home page
Advanced Search
Search Help

S3-18-all-fractions_k255_5777805_12

Organism: S3-18-all-fractions_metab_conc_12

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(11892..16214)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 1440.0
  • Bit_score: 2409
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N8_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 1433.0
  • Bit_score: 2362
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 1440.0
  • Bit_score: 2409
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 4323
ATGATCGATTTTCGCAGTGCGCGCGAGACCCGCGCGTCGGCGTTCGACTACATTCAGGTCCGGATCGCCTCGCCCGAGGAGATTCGCGGACCGAAGGACCCGAAGGAGCGTGAGCGCCTGGAGATGCAGGGGCTGCGCAACTGGTGGTCCTGGGGCGAGGTGCTCAAGCCCGAGACGATCAACTACCGCTCCTTCAAGCCCGAGAAGGACGGTCTTTTCTGCGAGCGCATCTTCGGTCCGGTCAAGGACTGGGAATGCCATTGCGGCAAGTACAAGCGCATCCGGTATCGCGGCGTGATCTGCGACCGCTGCGGCGTCGAGGTCACGTTGTCCAAGGTCCGTCGCGACCGCATGGGCCACATCGACCTCGCCGTCCCGGTGGCGCACATCTGGTTCTTCAAGACGCTGCCGAGCCCGATGGGCAATCTTCTCGATCTCACGCTGCGTGATCTCGAGAAGGTCATCTACTACTCGAACTACGTCGTCATCGACCCGGGCCAGCAGGACGTGCGCCCGAATCAGTTGCTCGACGAGGACGAGTATCTCAACCTTCGCCAGAAGTCGAAGGAAGAGAACGACGCCGCATTCCTCGCGGACATCGGCGCGCCGGCGGTGCGTGAGCTTCTCCGCCGCATCGATGTCGACAAGCTCGCCGAAGAGTTGCGCGTCGGTGTGATCGACGAGTCGTCGCAGCATCGCAAGAAGCAGATGCTCAAGCGCCTCAAGATCGTCGACGCGTTCCGCACGTCCGGTGATTCCGGTGACGTGCGCAACCGCCCCGAGTGGATGATCCTCGACGTCGTGCCGGTGATTCCGCCGGACCTTCGTCCGCTCGTCCCGCTCGACGGCGGCCGCTTCGCGACCTCCGACCTGAACGACCTCTATCGCCGCGTCATCAATCGCAACAACCGCCTCCAGAAGCTCATCGTGCATCGCGCGCCGGAAGTCATTCTCCGGAACGAGAAGCGCATGCTGCAGGAAGCGGTCGACGCGCTGTTCGACAACGGGCGTCGCTCCAAGGCCATTCGTGGCCGCGGCAAGCGTCCGCTGAAGTCGCTCTCCGACATGCTCAAGGGCAAGCAGGGGCGCTTCCGTCAGAACCTGTTAGGCAAGCGCGTGGACTACTCGGGCCGTTCGGTCATCGTCGTTGGCCCCGAGCTCCAGCTGCACCAGTGCGGGTTGCCGAAGGCCATGGCACTCGAGCTGTTCAAGCCGTTCATCATTCACAAGCTGGTCGAGAAGGGCATCGCCGAGACGGTCAAGCGCGCCAAGAAGATCGTGGAGCGGGAGAGCCCCGAGGTGTACGAGATCCTCGAGGAGATCATCCGCGATCACCCGGTGCTGCTGAACCGTGCCCCGACGCTCCACCGACTCGGTATCCAGGCATTTGAGCCTGTTCTGGTAGAAGGCAAGGCCATTCGAATCCACCCGCTCGTCTGCGCGGCGTTCAACGCCGACTTCGACGGCGATCAGATGGCCGTGCACGTGCCGCTCTCGTTCGAGGCCCAGCTCGAGAGCCGGCTGCTCATGCTGTCGTCGAACAACATTCTCAAGCCGTCCGACGGACGCCCGGTCGCGGAGCCGAGCCAGGACATCGTGCTCGGCTGCTACGTCGCGACCAAGGCGCCGCCGGAGTTCGCGAAGTATGAGAAAGATGTGAAGGCTGCCGCCTCGCTTCGCCGCTTCACCAACATCTCCGAAGTCGAGATGGCGATGGCGCACGGCGTGGTGAATCGGCAGACGCCGGTGCAGTTCCTCATCGAGGATGACGGACAGCAGCGGTGGGTGGTGACGACGGTCGGTCGCGTGATGTTCAACGCCATCGTGCCGAAGAACATTCCGTTCCAGAACCGCGACATGAAGAAGAAGGCGTTAGGCGAGCTCGTGTTCGAGAGCTACCGCCACGCCGGCCTTGCCGCGACCGTGGAGTTCCTCGACCGCCTCAAGGAGTTCGGCTTCTTCAACGCGACGCGCGGCGGCGTCTCCATCGGAATCGAGGATCTGCACATTCCGTCGGAGAAGGAAACGCTGCTCGGTGAAGCGACCGAGCGCGTCGAGCGCTTCCAGCGCGCGTATCAGACCGGCAACATCACGAACGGCGAGCGCTACAACAAAGTCATCGACACGTGGACGCACGCGAACTCCGACATTGCCGACGCCATGGTCAAGGCCATGCGCGAGGACAAGGCCGGGTTCAACCCCGTGTTCATGATGTTCGATTCGGGCTCACGTGGTAGCCGCGACCAGATCCGCCAGCTGGCGGGTATGCGCGGCCTCATGGCGAAGCCGCAGAAGAAGCTCACGGGTGGTATCGGCGAGATCATTGAAAGCCCGATCAAGTCGAACTTCCGTGAAGGGTTGTCGGTGCTCGAGTACTTCATCTCGACGCACGGCGCACGAAAGGGTCTGGCCGACACGGCGCTCAAGACGGCCGACGCCGGCTACCTGACGCGTCGTCTCGTCGACGTCGCGCAGGACGTGACGATCAGCGAAGAGGATTGCGGCACGATCCTCGGTCTCGAGATCGGCGCGCTCAAGGAAGGCGAAGACATCATCGAGCCGCTCTCCGAGCGCATCGTCGGCAACGTCGCCGCCGATGACGTCGAGGATCCGCACGAGATGGATGAGTCGGGTCGTCGCACGCTGATCGTGGAAGCTGGTCAGCTGATCGACGAGGAGAGTGCGCGTGCGATCGAGGAGTCGGGTCTCGAAACGATCAAGATCCGATCGGTGCTCACCTGCGAGGCAAAGCGCGGGCTGTGCCGCATGTGCTACGGCCGAAACCTGGCCACGATGGACATGGTGGACCTCGGCGAAGCGGTCGGCATCATCGCCGCGCAGTCAATCGGCGAGCCGGGCACGCAGCTGACGCTCCGTACGTTCCACATCGGTGGGACGGCCGCTCGTATCGCGGAGCAGACGCAGCGAAAGTCGAAGGTCGCCGGCGTCATCGAGTACGGCGAGCGCATGGTCGTGGTCACCAATCCCGAGGGACAGCGGATCGTCACCTCGTACGAGGGCGACATCTCGATCAGGTCGTCGCACGACAAGAACGCGGCGATCGCGGCGCGGTTGCAGGTGCCGTTAGGCGCGATCCTCATGGTGGAGGACGGGCAGGACGTGCGGCGTGATCAGGTGATCTTCACCTGGGACCCGTACACCAACCCGATCATCGCAGACACGGAAGGAACCATTCGCTTCGTCGACCTCGTCGAGGACGAGTCGGTGTCCGAGGAGCTCGATGAGCTCACCGGCCTCCGCCAGCGCGTCGTCATCGAGGACCGTGAGAAGAAGCTCCACCCGCACATCGAGATCATCCAGACGAAGGGCGGGAAGGAGAAGAAGGTCCGTGACTTCGTGGTCCCGGTGGGCGCGCAGCTCATCGTCGACGACGGTCAGGAGATCTTCGCTGGCCAGACGATTGCGAAGATCGGCCGCGAAGCGTACAAGACGCGCGACATCACGGGCGGTCTGCCGCGAGTCGCCGAGTTGTTCGAGGCTCGCCGGCCGAAGGACCCGGCCACGATCTCGGAGATCGACGGCATCGTCAGGTTCGGCGAGATCAAGCGCGGCAAGCGCGAGATCTTCGTGCAGCCCGCGAAGACCGTCGACAACACGGTCGTGGTGGACGAGGCGCAGGAGGCGCAGCTGTACGAAGTCGCTGCCGGCAAGCACCTTCGCGTGCACGAGGGCGACCGCGTGCGTGCTGGTGACCGTCTGTCCGAAGGTCCGGTGAACCCGCACGACATTCTCCGGATCAAGGGGCCGCGTGCGGTGCAGGAGTACCTCCTCAACGAAGTGCAGGAGGTCTACCGCCTGCAGGGCGTGAAGATCAACGACAAGCACATCGGCGTGATCGTTCGCCAGATGCTCCAGAAGGTCCGGGTCATGGATCCGGGCACGACGGAGTTCCTCGAGGGCGAGCACGTGGACAAGCAGAGCTTCCGCGACGAGAACGAGCGGGCGAAGAAGAAGAAGACCACGCCGGCGACGTCCGAGCCGCTGCTGCTCGGCATCACGAAGGCGAGTCTCACGACCCAGTCGTTCATCTCGGCGGCCTCGTTCCAGGAAACGACGCGCGTCCTCACCGATGCGGCGATTCGTGGGGCGAAGGACGACCTCCTGGGTCTCAAGGAGAACATCATCATCGGTCACCTCATCCCCGCCGGCACCGGCATGTATCGGTACCAGGAGGTGGATGTGGAGGCCGAGGCTCCTCCGATGCCCGAAGGGCTGCCATCGGCGGAGTCTTCGCTCCCGAGCTACTTCAGCTCGAGCCTCGCCGAGACCGGCTTCTCGGCTGGTGGGCTGGGCGAGGACTGA
PROTEIN sequence
Length: 1441
MIDFRSARETRASAFDYIQVRIASPEEIRGPKDPKERERLEMQGLRNWWSWGEVLKPETINYRSFKPEKDGLFCERIFGPVKDWECHCGKYKRIRYRGVICDRCGVEVTLSKVRRDRMGHIDLAVPVAHIWFFKTLPSPMGNLLDLTLRDLEKVIYYSNYVVIDPGQQDVRPNQLLDEDEYLNLRQKSKEENDAAFLADIGAPAVRELLRRIDVDKLAEELRVGVIDESSQHRKKQMLKRLKIVDAFRTSGDSGDVRNRPEWMILDVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLQKLIVHRAPEVILRNEKRMLQEAVDALFDNGRRSKAIRGRGKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELQLHQCGLPKAMALELFKPFIIHKLVEKGIAETVKRAKKIVERESPEVYEILEEIIRDHPVLLNRAPTLHRLGIQAFEPVLVEGKAIRIHPLVCAAFNADFDGDQMAVHVPLSFEAQLESRLLMLSSNNILKPSDGRPVAEPSQDIVLGCYVATKAPPEFAKYEKDVKAAASLRRFTNISEVEMAMAHGVVNRQTPVQFLIEDDGQQRWVVTTVGRVMFNAIVPKNIPFQNRDMKKKALGELVFESYRHAGLAATVEFLDRLKEFGFFNATRGGVSIGIEDLHIPSEKETLLGEATERVERFQRAYQTGNITNGERYNKVIDTWTHANSDIADAMVKAMREDKAGFNPVFMMFDSGSRGSRDQIRQLAGMRGLMAKPQKKLTGGIGEIIESPIKSNFREGLSVLEYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDVTISEEDCGTILGLEIGALKEGEDIIEPLSERIVGNVAADDVEDPHEMDESGRRTLIVEAGQLIDEESARAIEESGLETIKIRSVLTCEAKRGLCRMCYGRNLATMDMVDLGEAVGIIAAQSIGEPGTQLTLRTFHIGGTAARIAEQTQRKSKVAGVIEYGERMVVVTNPEGQRIVTSYEGDISIRSSHDKNAAIAARLQVPLGAILMVEDGQDVRRDQVIFTWDPYTNPIIADTEGTIRFVDLVEDESVSEELDELTGLRQRVVIEDREKKLHPHIEIIQTKGGKEKKVRDFVVPVGAQLIVDDGQEIFAGQTIAKIGREAYKTRDITGGLPRVAELFEARRPKDPATISEIDGIVRFGEIKRGKREIFVQPAKTVDNTVVVDEAQEAQLYEVAAGKHLRVHEGDRVRAGDRLSEGPVNPHDILRIKGPRAVQEYLLNEVQEVYRLQGVKINDKHIGVIVRQMLQKVRVMDPGTTEFLEGEHVDKQSFRDENERAKKKKTTPATSEPLLLGITKASLTTQSFISAASFQETTRVLTDAAIRGAKDDLLGLKENIIIGHLIPAGTGMYRYQEVDVEAEAPPMPEGLPSAESSLPSYFSSSLAETGFSAGGLGED*