ggKbase home page

S3-18-all-fractions_k255_5417713_6

Organism: S3-18-all-fractions_conc_56

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(5834..6397)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MWS3_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 172.0
  • Bit_score: 126
  • Evalue 1.70e-26
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 173.0
  • Bit_score: 125
  • Evalue 1.40e-26
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1160711 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium subsp. hominissuis A5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 173.0
  • Bit_score: 123
  • Evalue 2.00e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium avium → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGAGCTCGAAATCCTCGAGGACTGAGCGCGCCGACCTCCCGGAACGGGTGACGGTCGGCCGCATTCTCCGGCCGCACGGCGTCCGCGGCGAATTGGTGGTGGCTGCGCTCACGGACGTGCCCGGGCGGTTCGCTCCCGGAAATACGCTCCTGATGACCCGCGAGGAAGGGGGGCCGGCCGAGCCGGTCGTGGTGGAGATGGAGCGCCCGCACAAGACGGGCGTGGTCGTCCGCTTCGCCGGCGTCGAGGACCGCGACCAGGCCGAGGAGCTGCGCGGGCGCTGGCTGGAAGTCGAGCGCTCGCAGGTCCCTCCGGCGCCTCCCGGGACCTACTACCACTATGAGTTGCTGGGCTGCCGCTGCTTCGACGGCGGACGGGAGCTCGGCGAGGTGGTGGATCTGGCCGAGGACGGCGGCGGGTTGCTCCTGATCGTCGCGGATGGTGAGCGCCGGGTGCCGATCCCGTTCGTGGCCAGCTTCCTGCGGGAGGTCGACGTGGCCGCCGGACGCATCGAGCTGGAGCTGCCGCCGGGTCTGGTCGAGGCATGCGCGTCCAGGTCCTGA
PROTEIN sequence
Length: 188
MSSKSSRTERADLPERVTVGRILRPHGVRGELVVAALTDVPGRFAPGNTLLMTREEGGPAEPVVVEMERPHKTGVVVRFAGVEDRDQAEELRGRWLEVERSQVPPAPPGTYYHYELLGCRCFDGGRELGEVVDLAEDGGGLLLIVADGERRVPIPFVASFLREVDVAAGRIELELPPGLVEACASRS*