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S3-18-all-fractions_k255_6120085_3

Organism: S3-18-all-fractions_conc_56

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(3282..3719)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFE1_ROSCS similarity UNIREF
DB: UNIREF100
  • Identity: 32.4
  • Coverage: 148.0
  • Bit_score: 76
  • Evalue 2.00e-11
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 32.4
  • Coverage: 148.0
  • Bit_score: 76
  • Evalue 5.70e-12
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEE15966.1}; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.9
  • Coverage: 131.0
  • Bit_score: 76
  • Evalue 2.80e-11

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Taxonomy

Treponema brennaborense → Treponema → Spirochaetales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 438
ATGGCTACTTTCCGAGGTGACTCCACGTTCGGAAGGTGGCTGCTGGAGATCGCTGGGAATGTCTACCGTAACGAGCTCCGGCGGCGGTCGGCGGAAAAGAGGGAGGGCGTGGAGCAGCCGCTCGAGATGGCCGCAGACGACGAGAACGGTCTGCGGGAAGCACGGTTGCAGTCCTGGGATCTGAATCCTCTCGAGGCAACGCTCAAGAGAGAGCGGGAGTCCAGGTACCGTTCAGCCTTGCAGGAGCTTCCCGCTCACATGCGTTTCTGCTGCCAGCTGCGGTACGAGCAGGACCTCAAATATCATGAGATTGCCACCGTCATGAATATTTCTGTCGAGACCGTGAAGGCGCATCTGTACCAGGCCCGGAAACGTCTGACGTTGAAGCTGGGAGCTCCCCGGAAAGAGCCGGGCTCCGCCGAGGAGCAGACGTCGTGA
PROTEIN sequence
Length: 146
MATFRGDSTFGRWLLEIAGNVYRNELRRRSAEKREGVEQPLEMAADDENGLREARLQSWDLNPLEATLKRERESRYRSALQELPAHMRFCCQLRYEQDLKYHEIATVMNISVETVKAHLYQARKRLTLKLGAPRKEPGSAEEQTS*