ggKbase home page

13_1_20cm_full_scaffold_700_22

Organism: 13_1_20cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(22878..23933)

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 348.0
  • Bit_score: 539
  • Evalue 2.90e-150
DNA-directed RNA polymerase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 354.0
  • Bit_score: 443
  • Evalue 2.00e-121
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 355.0
  • Bit_score: 452
  • Evalue 9.30e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1056
ATGACGACTCTTGATTTGAGCGGGTTGGTCCGCCCCCACCTGGTCGAAATGACCAAACGGGAAGACAACCCGAATGCCGCCGAGTTCCGGCTGCAGCCGCTCGAGCGGGGCTACGGCTACACCCTCGGCAATTCGCTGCGTCGTATGCTGCTCTCGTCGCTGCGGGGCGCGGCCGTCTGGGCGTTCCGCTTGGACGGCGTCGTGCACGAGCACCAGACCATCACCGGCGTGGTCGAGGACGTGCACCAGATCATCCAGCGGCTGAAGCAGCTGACGCTGGTGCTCGCGCCGGACGTGGACGAAGCGGTCCTGCACATCAAGCACGACAAGGCCGGTCCCGTGTACGCGCGCGACATCGAGGCGCACAGCGCGGTGAGCATCGTGAATCCCGATCAGCTCCTGTTCACGGTCCAGGACGACCGCGACATCGGGGGCGAGCTGTACGTGAACAAGGGGCGCGGCTACGTGGAGGCCGAGCAGCACCCGGTCGACCGCACCATGCCGGTGGACGTCGTTCGCGTGGACTCGATCTACAATCCCGTCCGGCGCGCTAATTTCACCGTCGCGGAGACGCGCGTGGGACAGCGCACCGACTACGACCGGCTCACGCTCACGGTCGAGACCAACGGCACGATTTCTCCCGAGGACGCCGTCGCGTACGCCGCCGCGCTGGCGCAGGAGCACTTCCGCTTCTTCGTCGACTTCGGCAAGGTCCCGATGGTCGCGGCCCAGCCTGCGGGGAACGGGGGCGCAGCGACGAGCCGGCTGCGGGAGGTGCTCGCCCGCTCGATCGACGACGTGGGGCTCTCGGTGCGCTCGGTCAATTCGCTCAAGAACTCCAACATCCGGACGCTGGGCGACCTGGTGCAGTACCGTGAGGAAGACCTGCTCAAGGTCAAGAATGTCGGTGAGAAGGCGCTGGGCGAGATCGCCGAGCTGCTGCGCCGGGAGGGACTCAACTTCGGCATGAAATTCGAGGAGACCGAGGACGAGCTGAAGGTGGTCGACGCCGGCGCCGCGCCGCAGGCGCAGGCGAGCGAGGGAGACGCGGAGTAA
PROTEIN sequence
Length: 352
MTTLDLSGLVRPHLVEMTKREDNPNAAEFRLQPLERGYGYTLGNSLRRMLLSSLRGAAVWAFRLDGVVHEHQTITGVVEDVHQIIQRLKQLTLVLAPDVDEAVLHIKHDKAGPVYARDIEAHSAVSIVNPDQLLFTVQDDRDIGGELYVNKGRGYVEAEQHPVDRTMPVDVVRVDSIYNPVRRANFTVAETRVGQRTDYDRLTLTVETNGTISPEDAVAYAAALAQEHFRFFVDFGKVPMVAAQPAGNGGAATSRLREVLARSIDDVGLSVRSVNSLKNSNIRTLGDLVQYREEDLLKVKNVGEKALGEIAELLRREGLNFGMKFEETEDELKVVDAGAAPQAQASEGDAE*