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13_1_20cm_2_scaffold_13565_9

Organism: 13_1_20CM_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(5610..6179)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QZ33_CHLT3 similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 191.0
  • Bit_score: 181
  • Evalue 7.50e-43
rpoE; ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 181.0
  • Bit_score: 188
  • Evalue 1.10e-44
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 191.0
  • Bit_score: 181
  • Evalue 2.10e-43

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Taxonomy

R_Ignavibacteria_55_14 → Ignavibacteriales → Ignavibacteria → Ignavibacteriae → Bacteria

Sequences

DNA sequence
Length: 570
ATGACGAACGCAACTCCTGACCTGAAGCGTGAGAGTTTCGAGCGCGAGGCGCTGGTGCACCTGGACGTGCTCTACCGGGTCGCCCTTCGCCTCAGCGGCAACCCCTCCGACGCCGACGACCTGGTGCAGGAGACGATGCTCAAGGCCTATCGCGCCTGGGACCAGTATGAGAAAGGAACCAACGCCAAGGCCTGGCTGCTTACCATACTGCGGCACGCCTTCATCAACGAGTACCGCCGCCGCACCCGGCATCCCGAAACCGTAGACCTGGACAAGATCGAGCCGTACGCCGTCTTCCCGGAGGTGCAGGACGAGGACCCGCAGGGCGCGTTCTTCGACCGCATCGTGGATGACGAGGTGCTGCGAGCCATCGATCAGCTGCCCGTCGCGTTTCGTGAGACGCTGGTGTTGAGCGACGTGGAAGGGATGTCGTATCAGGAGATCGCCGGCATTCTCGGTATACCCGTTGGTACGGTGAAGTCGCGGCTGTTCCGGGCGCGCCAGCTGCTGCAGGGCAAGCTCTACGATTACGCCGTCGAGATGGGATACATCAAAGGAAGTCCCGCATGA
PROTEIN sequence
Length: 190
MTNATPDLKRESFEREALVHLDVLYRVALRLSGNPSDADDLVQETMLKAYRAWDQYEKGTNAKAWLLTILRHAFINEYRRRTRHPETVDLDKIEPYAVFPEVQDEDPQGAFFDRIVDDEVLRAIDQLPVAFRETLVLSDVEGMSYQEIAGILGIPVGTVKSRLFRARQLLQGKLYDYAVEMGYIKGSPA*