ggKbase home page

13_1_20cm_2_scaffold_1536_8

Organism: 13_1_20CM_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(6306..6929)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D650_MYXXD similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 189.0
  • Bit_score: 153
  • Evalue 1.80e-34
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG93808.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 192.0
  • Bit_score: 182
  • Evalue 6.90e-43
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 192.0
  • Bit_score: 182
  • Evalue 1.40e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 624
TTGCGGAACTCCTCACGTGAAACCAAGTTCGAGGCCGTGGCCAGCCAATCGGACCGCGCGCTCGTGGAGCGCTTGACCGCGGGCGACGACCGGGCTTTGGGGGAGCTGTACGATCGTCACGGCACGGCGATGTACGCGCTCGCCGTCGCGATCGTGCGGGAGCGGGCCGATGCCGACGAGGTGGTGGCGGATGCGTTCGGTCAGGCGTGGCGGACGGCGGTGCGGTTTGACCCGAGCCGAGGGAGCGTGGCGGCGTGGCTTGCCACCATCACCCGCACCCGGGCCCTCGACCTGTTGCGGTCGCGCGGCCGCCGCGCGCGGGCGCTCGCGCGCGCCGCGAGTGAGCGCAATGATGGACTCGCCGCGCCGCTGGCCGCGGCGGGCGACGCCCCGGACCGTGGCATCGAGCGCGAGGAGGCCCAGCGGCTCGTCGCCCGCTCGCTCGCCGAGCTGCCGGACGTGCAGCGTCGCGTGATCGAGCTGGCGTATTTCGGCGGCCTCACGCAGACCGAGATTGCCGCGGAGCTGCGGGAGCCGTTGGGGACGGTCAAGACACGCATGCGCGCCGGAATGGAAAAGCTGCGCGGCTCGCTCGCGCCGCTGCTCTCGAGCGAGGCGTCATGA
PROTEIN sequence
Length: 208
LRNSSRETKFEAVASQSDRALVERLTAGDDRALGELYDRHGTAMYALAVAIVRERADADEVVADAFGQAWRTAVRFDPSRGSVAAWLATITRTRALDLLRSRGRRARALARAASERNDGLAAPLAAAGDAPDRGIEREEAQRLVARSLAELPDVQRRVIELAYFGGLTQTEIAAELREPLGTVKTRMRAGMEKLRGSLAPLLSSEAS*