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13_1_20cm_2_scaffold_161_26

Organism: 13_1_20CM_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(27506..27751)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9F2L4_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 68.0
  • Bit_score: 58
  • Evalue 4.10e-06
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:AJT63581.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 72.0
  • Bit_score: 58
  • Evalue 4.50e-06
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 65.0
  • Bit_score: 57
  • Evalue 1.70e-06

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Taxonomy

Streptomyces lydicus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGGCGGCGGGGGACCGAGGTGCGGTCCGCGAGCTGCTGGCGCGCTACCGCAGCACTCTCTACGCAACCGCCTACGCCGCACTGGTCGACCCCGAGCTCGCCGAAGCGGCCGTGGCCAGCACCTTCGAGCAAGCGTGGCGCACGGCTGCCCGGTTTCTGAGCACGCGCGGGAGCGTGTCAGGCTGGCTCACCCACCTCACCCGGCTCAACGTCGCGGCGCTATCGGCAGGCTGGCCTGCCCACTAA
PROTEIN sequence
Length: 82
MAAGDRGAVRELLARYRSTLYATAYAALVDPELAEAAVASTFEQAWRTAARFLSTRGSVSGWLTHLTRLNVAALSAGWPAH*