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13_1_20cm_2_scaffold_589_25

Organism: 13_1_20CM_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(25834..27636)

Top 3 Functional Annotations

Value Algorithm Source
msbA; lipid A export ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 601.0
  • Bit_score: 609
  • Evalue 6.60e-171
Lipid A export ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A621_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 598.0
  • Bit_score: 498
  • Evalue 1.10e-137
ABC transporter transmembrane region similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 598.0
  • Bit_score: 527
  • Evalue 3.90e-147

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1803
ATGCGGTCGGGCGCCCGGCTGCTCCAGCTCCTCCGCCCGTACTCCTTCCTCTTCACCGCCGCCATCCTCGCCACCGTCCTGGCGTCGGTGCTGGATGGCTTCACGATCGCGTTGCTGATCCCGTTCCTGCGGACGCTGTTTGGCCAGCAGGCGCTAGGGCCCGCCGGGGGCTCCGCCGTGCAGGCGGTGCTCGCCCGCCTGACGGGGGCGTTGATCACGGCGGGGGCGCCGCAGGCGGCGCTGCGCAACGTAGTAGTCATCCTGCTCGTCGCGCTGGTCCTCAAGAACGCCGCCGAATACGCCGCCGCCTACTGGAACGTGGTGATCCAGGAGAGCGTGGTGCGCGACCTGCGGCTGCGGCTGTTCCGCCACCTGCAGCTGCTGCCGCTTGGTTACTTCCAGCGCACCAAAGTGGGCCAGAGCATTGCCCGGCTGATCTACGACACCGACGCCGTGAAGATGGCGGTCAGCGCGGCGCTCGCCTCGCTGCTACAGAACAGCGTCATGATCGTCGTCTACCTGGCGATCCTGGTCGGCCTGTCGCTGCGGCTCACGCTGGTGGCGTTGCTGTTCGCGCCGGTCTTGCTGTTTGTGATCCGCCCCCTCATCTCCCGGCTGCGCCGCCGCTCTAGCGAGCTCGTGACCGAGCGCGGCGAGCTCACCAGCCACGTGAGCGAGATGATGAGCTCGGTGAAGCTGGTGCGTGCCTACGTCGCCGAGGCGTTCGAGCTGTCGCGGTTCAAGGCGCTCGCCGACCGCTACCGCAAGCGGGTGCTGCGTGCCCAGCGCTTCTCCTCCCTCACCAGCCCCGTGACCGAGGTATTCGGTGGGATGATGATCGTGGGCATCCTGTGGTACGGCACGCTGCTCGCCCTCGGCGACCGCCCGGCGATGCGTCCGGAGGAGCTGATCACGTTCCTGGTCGTCGCCTTGCGGCTGATGTCGCCGGTCAAGTCGGTATCCAATTACCCGGCGGTGATGGCCGGCGCACTGGCGTCGGCGGGCCGCGTGTACGAGGTACTCGACTTGACTCCCGACGAAGGTGACCGGCCGGGGGAGACGACCGCACAATTCCACGAGCGGATCGAATACCGCCGGGTCTCGTTCGCCTACGCCGACGAAGCCGAGGTGCTGCGCGACGTGGAGCTGGAGGTGCGGCGCGGTCAGGTCGTGGCGGTCGTGGGGCCGTCGGGGGCGGGGAAGACCACCCTGGTGGACCTGCTGCCCCGCTTCTACGAGCCCACGGCGGGCGCGCTCTTCATGGACGGGGTCCCGATCACCCGGTACACCCGGCGCTCGCTGCGCGCCCTGATGGGGATCGTCTCGCAGGAGACGATCCTGCTCAACGATACGGTGTTTGCCAACATCGCCTACGGGCGCACCGACTTCACGCTGGACCAAGTGCGCGCCGCCGCCGCGGCGGCGAACGCCGAGGACTTCATCGCGCGGCTGCCCGAGGCCTACCAGACGGTGCTGGGAGAGCGCGGCACGCGGCTGTCGGGCGGCCAGCGCCAGCGCATCGCCATCGCCCGGGCCGTGCTGCGCGACCCGCCGATCCTCATCCTGGACGAGGCCACGAGCCAGCTCGACACTGAGTCGGAGCGGCTCGTGCAGGACGCGATCGACCGCCTCATGCGGCACCGCACGGTGTTCGTCATCGCCCACCGCCTGGCCACCGTGCAGCACGCCGACCGGATCGTGGTGCTCCACGAGGGTCGGATCGTCGAGTGCGGCAGCCACGCGGATCTCCTCGCCGCCGATGGGCTCTACCGCCGCCTCTATAACCTGCAGTTCCGGACCTGA
PROTEIN sequence
Length: 601
MRSGARLLQLLRPYSFLFTAAILATVLASVLDGFTIALLIPFLRTLFGQQALGPAGGSAVQAVLARLTGALITAGAPQAALRNVVVILLVALVLKNAAEYAAAYWNVVIQESVVRDLRLRLFRHLQLLPLGYFQRTKVGQSIARLIYDTDAVKMAVSAALASLLQNSVMIVVYLAILVGLSLRLTLVALLFAPVLLFVIRPLISRLRRRSSELVTERGELTSHVSEMMSSVKLVRAYVAEAFELSRFKALADRYRKRVLRAQRFSSLTSPVTEVFGGMMIVGILWYGTLLALGDRPAMRPEELITFLVVALRLMSPVKSVSNYPAVMAGALASAGRVYEVLDLTPDEGDRPGETTAQFHERIEYRRVSFAYADEAEVLRDVELEVRRGQVVAVVGPSGAGKTTLVDLLPRFYEPTAGALFMDGVPITRYTRRSLRALMGIVSQETILLNDTVFANIAYGRTDFTLDQVRAAAAAANAEDFIARLPEAYQTVLGERGTRLSGGQRQRIAIARAVLRDPPILILDEATSQLDTESERLVQDAIDRLMRHRTVFVIAHRLATVQHADRIVVLHEGRIVECGSHADLLAADGLYRRLYNLQFRT*