ggKbase home page

13_1_40cm_3_scaffold_50602_3

Organism: 13_1_40CM_3_Euryarchaeota_megabin_63_11

megabin RP 34 / 55 MC: 31 BSCG 25 / 51 MC: 18 ASCG 38 / 38 MC: 38
Location: comp(1006..1512)

Top 3 Functional Annotations

Value Algorithm Source
Methanogen homoaconitase small subunit n=2 Tax=Methanosarcina mazei RepID=HACB_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 165.0
  • Bit_score: 178
  • Evalue 4.40e-42
leuD; 3-isopropylmalate dehydratase small subunit LeuD Tax=RBG_16_Euryarchaeota_68_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 167.0
  • Bit_score: 215
  • Evalue 4.50e-53
Coenzyme B synthesis from 2-oxoglutarate small subunit similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 165.0
  • Bit_score: 178
  • Evalue 1.20e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Euryarchaeota_68_13_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 507
ATGCAACGGCAATTCCGCGGCCGTGTCTGGACGTTTGGGGACGATATCTCGACCGACCACATTATTGCGGGAAAGTATCTGGGCACGACCGATTCCAAGATGTTTGCAACGCATGCCTTCGAAGCCGTCGATCCGGCCTGGGCCAAGAGCGTCCAGGTCGGCGACCTCATCGTGGCCGGCGACAACTTCGGGTGCGGATCGAGCCGCGAACAGGCCCCCATCGCGCTGCAAACACTCGGCGTGTCCGCGATCCTCGCCAACTCGTTTGCTCGGATTTTCTTCCGGAACTCGATTAATCTTGGACTCCCGGTGCTGGAGTGTCCGGGATTGCGGCGAAAGGTGAACGCGGGGGACGTGATCGAGGTCGACATGGCGAAAGGTGAGGTCCACCTCCCGGACGGCGGCGTCGACCGTTTCAATGCGCTCCCGCCGAACGTGCTCGAGATCCTGGAGGCTGGCGGCCTCGTAGCGAAGATTCGAGCCGAGCTGGCCCCGCACCGAACGTGA
PROTEIN sequence
Length: 169
MQRQFRGRVWTFGDDISTDHIIAGKYLGTTDSKMFATHAFEAVDPAWAKSVQVGDLIVAGDNFGCGSSREQAPIALQTLGVSAILANSFARIFFRNSINLGLPVLECPGLRRKVNAGDVIEVDMAKGEVHLPDGGVDRFNALPPNVLEILEAGGLVAKIRAELAPHRT*