ggKbase home page

13_1_40cm_scaffold_98884_7

Organism: 13_1_40CM_1_Euryarchaeota_megabin_63_20

megabin RP 35 / 55 MC: 32 BSCG 23 / 51 MC: 20 ASCG 38 / 38 MC: 38
Location: comp(4156..6009)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair and recombination protein RadA n=1 Tax=Thermococcus zilligii RepID=UPI00029ACA74 similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 622.0
  • Bit_score: 501
  • Evalue 1.10e-138
Pko radA intein Tax=CG_Micra_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 622.0
  • Bit_score: 531
  • Evalue 1.80e-147
Pko RadA intein similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 622.0
  • Bit_score: 490
  • Evalue 5.40e-136

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Micra_02 → Micraarchaeota → Archaea

Sequences

DNA sequence
Length: 1854
CGGTTTCTTACAGTCACTGACGACGGCGTCCAGTGGATGCCCGCTGCGAAGCTCAGAGTGGGCGATCCCATCGGAGCACCCATGTCGATGGCCATCCCGGAGGAACCGTTGCCAGCCGATGACGCGTATTTCCTGGGCCTTTTTGTGGCCGAAGGGACCGGTAATCCCGTCTCGATTTGCAACACGGATTCCAGACTTATCGACTGGCTCACGAGCTACGTCGAACGCCGGTTTGGATATCATGCCACCGTTCGGGTGAGGGCAGGAGCCCCTCACGTCAGAACGGTCCTCCTTCGCAAGCCAACGGAGGAATTCCTTGGTGCGCTCGCCCACGAGAGAGCGGGCGAGAAGCGCGTTCCAGATGCAATCTTCGTTGCGCCGAACGACGCCGTTCGGAGTTTCCTGGCCGGATATCTCGATGGCGATGGCTGCATAGACAAGACGGTAAGTGCAACGACGAAGAGTCGGGATCTTGCGCACGGGCTCGCATACCTGTTTACGCGGTTGGGGATACGGGTTTCGATCACGTCGCGGGTGACCCAGGGGGTCCCTTACTACATCTTGCACGTGGTGGGGGCGAATCGCGACAAACTGGTCCTTCCTTTGAAGGCGAAGAGTTTGCCTGAGTACCACACGCACAATTCTGCCCACGGATATCCCACGCGGATACCCCGCTACCTTGCCCGGATCTACCGTGCGACGCTGGGAGGCAAAACGGGCAGGCGCGGGAAACCCATCGGGCGGAGGGCAAACGACGCCCAGACGTTCTATCATGTCCTGACACGGCGGCGCTACGAGCGAATCACCCTGAATGAGAAGACGTTCCGGCGAGTTGCAGAAGAGTTTGTCGTCGGATACCACCGCCTCGTGCGGGCGGAAGAACTCACCAAGTGCCTTGCTGGCCTATCGGGTGACGAGTTCCGAGAGCTCGTCGCAATCCTGCCGTTCGCGTTCAACACCGTCGCGCCTGCAGTGGGAATTTCGAAACCAGCCTTGAACAACTATCTGTTCAGAGGCCTCCCCCGGGACCGGCAGATACGTGACGCTCTGGCGGCTGCTCTCCTTCCTCTGATCGTCGATCGCCGCAAGGCCCTGGAAGAAGCGTTCCCGCAAATCCGGAATATCTCCTCGCTGGCCTGGGACGAGATTGTCTCAATCCATCCGGAGCCATACGCGGACTACGTCTACGATTTCGTGGTCCCGAACGGTCATGCGTTTGTGGGAGGTCCGATTCCCACATTCATGCACAACAGCCAGCTCGGTCATCAGCTCGCGGTGAACGTCACGCGTCCGGAGGACGACGGCGGCATGAACGGGGACGTCGTCTGGATCGATACGGAGCAGACGTTCCGTCCGGAACGGATCCGCCAGATGGCTGAGGCCATGGATCTTGACGCGGAGGCGATCCTGAAGCGGATCCACGTGGCGCGCGCATTCAACAGCCACCACCAGATGCTCCTCGTCGAGAAAGCCCAGGAGCTCACGCAGGACTTCCCGATCCGGCTCGTCGTGATCGACTCCCTCACGGCGCACTTCCGCGCGGAGTACATCGGCCGCGGCGTGCTGGCGGAGCGGCAGCAACTCCTGAACAAGCACATCCACGAGCTGATGCGGTTCGGGGACATCCACAACGCCGTGATTTACGTGACGAACCAGGTCCACGCGAAGCCCGATGCCTTCTTCGGGGATCCGACCCGCCCGGTCGGCGGCCATATCGTGGGCCACAGCGCGACGTTCCGCGTCTACTTGCGCAAGTCAAAGGGTGGCAAGCGGATCGCGCGGCTCATCGACTCTCCGAACCTGCCCGAGGCGGAAGCCGTGTTCAGCGTGTCCGAGGACGGAATCCGGGATTGA
PROTEIN sequence
Length: 618
RFLTVTDDGVQWMPAAKLRVGDPIGAPMSMAIPEEPLPADDAYFLGLFVAEGTGNPVSICNTDSRLIDWLTSYVERRFGYHATVRVRAGAPHVRTVLLRKPTEEFLGALAHERAGEKRVPDAIFVAPNDAVRSFLAGYLDGDGCIDKTVSATTKSRDLAHGLAYLFTRLGIRVSITSRVTQGVPYYILHVVGANRDKLVLPLKAKSLPEYHTHNSAHGYPTRIPRYLARIYRATLGGKTGRRGKPIGRRANDAQTFYHVLTRRRYERITLNEKTFRRVAEEFVVGYHRLVRAEELTKCLAGLSGDEFRELVAILPFAFNTVAPAVGISKPALNNYLFRGLPRDRQIRDALAAALLPLIVDRRKALEEAFPQIRNISSLAWDEIVSIHPEPYADYVYDFVVPNGHAFVGGPIPTFMHNSQLGHQLAVNVTRPEDDGGMNGDVVWIDTEQTFRPERIRQMAEAMDLDAEAILKRIHVARAFNSHHQMLLVEKAQELTQDFPIRLVVIDSLTAHFRAEYIGRGVLAERQQLLNKHIHELMRFGDIHNAVIYVTNQVHAKPDAFFGDPTRPVGGHIVGHSATFRVYLRKSKGGKRIARLIDSPNLPEAEAVFSVSEDGIRD*