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13_1_20cm_2_scaffold_59488_4

Organism: 13_1_20CM_2_Euryarchaeota_64_92

partial RP 20 / 55 BSCG 6 / 51 ASCG 21 / 38
Location: 1760..2164

Top 3 Functional Annotations

Value Algorithm Source
Nmd3 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TBX2_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 30.3
  • Coverage: 132.0
  • Bit_score: 73
  • Evalue 1.60e-10
NMD protein affecting ribosome stability and mRNA decay Tax=RBG_16_Euryarchaeota_68_13_curated UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 128.0
  • Bit_score: 158
  • Evalue 6.90e-36
Nmd3 similarity KEGG
DB: KEGG
  • Identity: 30.3
  • Coverage: 132.0
  • Bit_score: 73
  • Evalue 4.50e-11

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Taxonomy

RBG_16_Euryarchaeota_68_13_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 405
GTGCCGTACGAAACGGCGAAGATGTTTTGCGTCGAGTGCGGGGCCGAAGGGCCGACGTATCAAGGCCTCTGCGCCCGGGATTTCCTGAAGAAGCATCCGGTCGTCGCGCCTCCGGAGGTCCTCGACATCGAACGCTGCACGTCCTGCGGCTCCTTCCGCCTGAAATCGGGCTGGTCCAAGGTCGACCGCGAACTCGCGCTCACGGGACTCCTTCGCGAGACGATCCCGAAGATGGCCCCGTGGGAACGCATCACGTTCACGCACGTCGCCCGCGAGGAGGACGCGAACAACCTCTCGCTGACGGTCAAGGCGCTCGGACGGTTCGAGGACCTGCAGTCCGTCCAAGACTTCCGAGTCCGCGTGCGGATCAAGCCCTCTCTCTGCGATTCGTGCCAGAAGCAGCGG
PROTEIN sequence
Length: 135
VPYETAKMFCVECGAEGPTYQGLCARDFLKKHPVVAPPEVLDIERCTSCGSFRLKSGWSKVDRELALTGLLRETIPKMAPWERITFTHVAREEDANNLSLTVKALGRFEDLQSVQDFRVRVRIKPSLCDSCQKQR