ggKbase home page

13_1_20cm_3_scaffold_324_14

Organism: 13_1_20cm_3_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(12389..13561)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F214_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 34.2
  • Coverage: 187.0
  • Bit_score: 81
  • Evalue 2.20e-12
ECF subfamily RNA polymerase sigma-24 subunit Tax=RBG_16_Actinobacteria_68_12_curated UNIPROT
DB: UniProtKB
  • Identity: 43.3
  • Coverage: 349.0
  • Bit_score: 227
  • Evalue 3.50e-56
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 34.2
  • Coverage: 187.0
  • Bit_score: 81
  • Evalue 6.20e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1173
ATGACGCCCCTGCTGGCGCAGCGGCCGCGCACGGATCGGGCCTTCGAGCGGTTGTACAGGCGGCACGTCGGCGACGTGTACCGCTACGCGCTCGCGGTCATGCGCAACCCCGCCGATGCCGAGGACGTCACGCAGACGACCTTCTTGAACGCGTACCGCGCCTTCGTCGAGAAGGGGAACCGGCCGGAGAAGCCGCAGAACTGGTTGATCGCGATCGCGCACAACGTTTGCCGGCAGCGCTTCCGTCAGTCCGCGCGCCGTCCCTCGGAGGTCGCATTCGACGGCGACATCGCCGACACGCTCGTCGACGAGGAGCTGCCGAGCGGGGAAGACATCCGCCGCGCGCTCGGCCACCTTGCGTTCAACCAGCGGGCGGCGACGAGCGCGGTCGAGACACTGATCTTCCGTGCGCGCCGTGCGCTGCGCGAACAGCTCGAGGGATCGCTGACGTGCGGCGAAGCCGAGTTTGCGATCTCCAGGCAGCTCGACGGCCGCCTGTCCCGGCAGGAGCGCGGGCAACTTCGCGCGCACCTCCGCGAGTGCCCGGAATGCGCATCGTTCGCGCGGCGCCAACGAGCGCAGCGCGGAGCTCTCAAGTCACTTGCGCTCGTGCCGGTTCCAGGCTCTCTCGCCTCCTTCTTCGGCGGAGGCGGCGCTGCGGTCGGCACCGGTCTCGCCCTCAAGGCCGCGGCTGCCGTCACCGCGGGCCTCGTCATCGGCGGCGCCGGCGTGGCAACCGTCGAGCATGCGCCGTGGAAGCCGCATTCCGCACGGGCCGCGGCTCCGGCGGTGTTCCAGTCCGTCTCGCGCCACGCGTCCGTGCCGGCGCCGCGCGAGCACATCCCCGTCGTCGCCGCGAACGTGCGACGCCAAGCCCACGCTGCTACTGCGCGCACCGCGCGGAAGGCGCAGCGCACGGCCGCACACGTGCACGCGGCGACGCACGGCCGCGGGCGTGCGCTGGGCCGTCAGAAGCACTTCGACGCGAGCCTCTCGTCGCGAAACACCGTGCGGTTCGCGCACGTCCACCCGGTGCATCCCGCGCATCCGGCCGCCCCTGTGCGACCCACCCATGCGCGCGGCCACTCCGCCAAGCCGAGGTCGTCGAAGCCGAAGGCCTTGCCCGGCCCGGCCGACCACGGCGGCGGCAACGGCAACGGCAAGAAGCCGTAG
PROTEIN sequence
Length: 391
MTPLLAQRPRTDRAFERLYRRHVGDVYRYALAVMRNPADAEDVTQTTFLNAYRAFVEKGNRPEKPQNWLIAIAHNVCRQRFRQSARRPSEVAFDGDIADTLVDEELPSGEDIRRALGHLAFNQRAATSAVETLIFRARRALREQLEGSLTCGEAEFAISRQLDGRLSRQERGQLRAHLRECPECASFARRQRAQRGALKSLALVPVPGSLASFFGGGGAAVGTGLALKAAAAVTAGLVIGGAGVATVEHAPWKPHSARAAAPAVFQSVSRHASVPAPREHIPVVAANVRRQAHAATARTARKAQRTAAHVHAATHGRGRALGRQKHFDASLSSRNTVRFAHVHPVHPAHPAAPVRPTHARGHSAKPRSSKPKALPGPADHGGGNGNGKKP*