ggKbase home page

13_1_20cm_3_scaffold_316_6

Organism: 13_1_20cm_3_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 4361..4924

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SC48_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 175.0
  • Bit_score: 154
  • Evalue 9.90e-35
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB74216.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geod UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 175.0
  • Bit_score: 154
  • Evalue 1.40e-34
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 175.0
  • Bit_score: 154
  • Evalue 2.80e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGCTGCAGATGGAGGCCTGGCGGCCTACCGTAACCCGCTCGGCGTTGACCGCGATTAATCAGCGCGTGCCGGATCCCTTCGAGCGGCTATTCCTGCAGGAATATCCGAAGGTCGTCGCCATCGCCTACCGGGTGCTTGCCGACCGGCCGGCGGCCGAGGACGTTGCCCAGGAGGTCTTTATGAAGTTCCACCGGAGTCACTCCCCCGACTCCGAGCGCGCCTCCGGGTGGCTCCATGCGGCCGCCGTCCACTCGGCCCTGAACGTCGTCCGCGGGGAGCGGAGGCGGGCGCTCCGGGAGACCGCTCATGCTCTCGACCCGGTGAAGACGCCTGTCGAAAGTCCGGAGCGGCTGGTCGAGCAGTTGGAGCAACGGCGCGACGTGCGCCGCGCACTGAGCCGGTTGCCGCAACGGACCGCGGCGCTGCTGATGCTGCGCCACAGCGGATTGAGCTACGCGGAGGTCGCGACCGCGATGGGGATCAAGGTTGGAAACGTGGGAACGCTGCTGCGCCGGGCGGAAGATGCCCTGCGCAAGGAGGTAAGCCGTGCGACACCTGAGTGA
PROTEIN sequence
Length: 188
MLQMEAWRPTVTRSALTAINQRVPDPFERLFLQEYPKVVAIAYRVLADRPAAEDVAQEVFMKFHRSHSPDSERASGWLHAAAVHSALNVVRGERRRALRETAHALDPVKTPVESPERLVEQLEQRRDVRRALSRLPQRTAALLMLRHSGLSYAEVATAMGIKVGNVGTLLRRAEDALRKEVSRATPE*