ggKbase home page

13_1_20cm_3_scaffold_421_24

Organism: 13_1_20cm_3_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 22778..23830

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Patulibacter americanus RepID=UPI0003B5AA12 similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 370.0
  • Bit_score: 314
  • Evalue 1.80e-82
RNA polymerase sigma-28 subunit; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Actinobacteria_68_12_curated UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 348.0
  • Bit_score: 370
  • Evalue 2.30e-99
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 359.0
  • Bit_score: 312
  • Evalue 2.00e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
ATGGCAGTCGTAGACGAGCGACTACAAGCGCTCCTCGAGCAGGGCGAAGAACAGGGGTGCCTGAATCTCTCCGCCGTCGGCGAGTTCCTCCAGGAGGCCGAGCTCGACGAGGAGCAGACGACGGGCTTCTTCGAGCAGCTCGAGGAGCGGGGCATCCCGCTCACCGACGATTGCGCGCGGCCGGGCTCGATCGAGGGCACGTACGTCAACGCCGACCTCGCAGTCGCGACGACGGATGCGCTGCAGCTCTTCCTCAACGAAGCCGGCCGCTACAGGCTCCTGACGGCCGCCGAGGAGGTCGAGCTCGCAAAGCGGATCGAGCGCGGCGACAAGGAGGCGAAGGACTTGATGATCAACTCGAACCTTCGCCTGGTCGTGTCGATCGCGAAGAAGTACCAGGGGCACGGGATCTCGCTCCTCGACCTGATCCAGGAGGGGATCATCGGGCTCATCCGCGCGGTCGAGAAGTTCGACTGGCGCAAGGGGTTCAAGTTCTCGACCTACGCGACGTGGTGGATCCGCCAGGCGGTACAGCGCGGCGTCGCCAACAAGTCGCGCACGATCCGCATCCCAGTCCACATCGTCGAGCGCGAGCAGAAGATCTCGCGGGCCGAGCGCGAGCTGACCGCGAAGCTCGAGCGCCCGCCGACGGACGAGGAGATCGCGCACAAGACGAAGCTGTCGTTGAAGCACGTCAAGGAGGTGCGGGCCGCCGCGCGTGCGGTGACGTCGCTGGACAAGCCCATCGGGGCGGAGGGAGACGCGAGCTTCGGCGACCTCATCGCAGGCGAGAACGCGGAGCCAGCCGAGGAGGTACACGTCAGCTTCGCCGAGCGCGCGGTGCGGAAAGCCGTCGACACGCTGCCCGAGCGCGAGCGCGAGGTGGTCAAACTGCGGTACGGGATGAACGGCGATCGCGACCCGCACTCGCTCGAGGAGATCGGGCGGGCGCTGGGGATCACGCGCGAGCGCGTGCGCCAGATCGAGTCACAGGCGCTGGCGCGGCTCGCCGAGCGCCGGGAGGTCGCCGCACTCGGCGAGAATGCGGCCTAG
PROTEIN sequence
Length: 351
MAVVDERLQALLEQGEEQGCLNLSAVGEFLQEAELDEEQTTGFFEQLEERGIPLTDDCARPGSIEGTYVNADLAVATTDALQLFLNEAGRYRLLTAAEEVELAKRIERGDKEAKDLMINSNLRLVVSIAKKYQGHGISLLDLIQEGIIGLIRAVEKFDWRKGFKFSTYATWWIRQAVQRGVANKSRTIRIPVHIVEREQKISRAERELTAKLERPPTDEEIAHKTKLSLKHVKEVRAAARAVTSLDKPIGAEGDASFGDLIAGENAEPAEEVHVSFAERAVRKAVDTLPEREREVVKLRYGMNGDRDPHSLEEIGRALGITRERVRQIESQALARLAERREVAALGENAA*