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13_1_20cm_3_scaffold_5456_23

Organism: 13_1_20cm_3_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(17254..17805)

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor Tax=RBG_16_Actinobacteria_68_12_curated UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 182.0
  • Bit_score: 201
  • Evalue 7.40e-49
RNA polymerase sigma-H factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14631759 bin=bin9_gal15 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15 similarity UNIREF
DB: UNIREF100
  • Identity: 35.2
  • Coverage: 176.0
  • Bit_score: 109
  • Evalue 2.70e-21
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 27.4
  • Coverage: 175.0
  • Bit_score: 77
  • Evalue 4.20e-12

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGACTGTCGAGCAAAGCGACGCGCAGCTCGTCTCCCGCTGCCGCGAGGGCGACGCCGACGCCTGGAACGAGTTCGTGGAGCGGTTCTCTCGCTACGTGTACGCAATCTGCGGCCGCGGCTTCCGCCTCGCACAGCACGACGCCGAGGATGTCTTCCAGGAGGTCTTCGCGCGTGCCTTCGAGAAGCTGCCGGAGCTGCGAAGCGACGATGCGGTGCGGCCGTGGCTCGCCATGCTCACGCGCCGGCTCTGCATCGACAAGCTGCGCCTGCTCGCGCGTGACACGACGTCGGAGGCAGATCCGGACGAGGAGGAGGTCGGCGACGTGCTTGCCCAGCTCGACGATGCAATGGCCGTTCGCGCCGCCCTCGACAGCGTAGGCGACCCATGCCGCGAGATCCTCGACCGCTTCTTCTGCCGCGACGAGAGCTATCGGACGATTGGCGACAGCCTCGACATGCCCGCCGGGACGATCGCCAGCCGTATCTCGCGTTGCCTCGAAAAAGTTCGTGTCGAACTCGATGGAAGGAGTCGGGGCTCTCGGCCGTCATGA
PROTEIN sequence
Length: 184
MTVEQSDAQLVSRCREGDADAWNEFVERFSRYVYAICGRGFRLAQHDAEDVFQEVFARAFEKLPELRSDDAVRPWLAMLTRRLCIDKLRLLARDTTSEADPDEEEVGDVLAQLDDAMAVRAALDSVGDPCREILDRFFCRDESYRTIGDSLDMPAGTIASRISRCLEKVRVELDGRSRGSRPS*