ggKbase home page

13_1_20cm_4_scaffold_2010_3

Organism: 13_1_20cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(1384..1875)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 156.0
  • Bit_score: 174
  • Evalue 1.50e-40
hypothetical protein n=1 Tax=Streptomyces sp. AA1529 RepID=UPI0002ED4333 similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 171.0
  • Bit_score: 166
  • Evalue 2.20e-38
ATP-dependent DNA ligase similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 170.0
  • Bit_score: 162
  • Evalue 1.20e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GTGCCGGGCAAGCGATTCTGGGTGAAGATCAAGCACCAGCGAACCGCGGACTGCGTCGTCATCGGATGGCGCAGGTCGAGCGACGGCTCAACACTCGGCGCGTTGCTGCTCGGCCTTTACGACAAGAAGGGGACGATGCATTACGTAGGTCACACTTCCTCATTCAACGCGGCGGAGCGCAAGGAGCTGATCGCGAAGCTCAAACCCCTTCAGACCGAGATTCCCGAGGAAGAATGGAAAGCCAATCCAGGTCGGATGCCCGGTGGAGTGAGCCGTTGGTCCCGAGGCAAGGACAAGGACGCTGAGTGGGTGGCGGTGCGGCCGGAGCTGGTCTGCGAGGTCACCTACGACAAGCTCGAAGCCGGCGAGCGTTTCCGCCACGCAACCGGATTTCTTCGCTGGCGGACGGACAAACCACCGAAGAAGTGCGGCTTCGACCAGATCGCGTCAGTGGCCGAGTTCGACGTGAGAGGAATCTTCGGGAGCAAGTAG
PROTEIN sequence
Length: 164
VPGKRFWVKIKHQRTADCVVIGWRRSSDGSTLGALLLGLYDKKGTMHYVGHTSSFNAAERKELIAKLKPLQTEIPEEEWKANPGRMPGGVSRWSRGKDKDAEWVAVRPELVCEVTYDKLEAGERFRHATGFLRWRTDKPPKKCGFDQIASVAEFDVRGIFGSK*