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13_1_20cm_4_scaffold_875_11

Organism: 13_1_20cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 8845..9363

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA74_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 166.0
  • Bit_score: 151
  • Evalue 7.70e-34
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 172.0
  • Bit_score: 226
  • Evalue 2.60e-56
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 169.0
  • Bit_score: 213
  • Evalue 4.60e-53

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 519
GTGCGCCGCGTCTTGGCCGGCGACACCGGCGCGTACGCCGCGCTTGTCGCACGGTACCGTGATCGCCTCGGCCGCTACGCCGTACACATGCTCGGAGACCGGCAGGACGCGGAGGAAGCGCTGCAGGACGCCTTCGTCCGGGCGCATCGCTCGCTGGCGCGCTGCGACGATCCGGAGCGATTCGGCGCCTGGCTGTACGGCATCCTCGTGAACCGGTGCCGCACGACGGGCGGGCGCGCCGCGCGACGCGCGCGGCTGTTCGTGCGCGACGACGCGGCGCTCAGCGGTGTGCCGCTGCCCAGTCCGGCCGAGCGCGCCGAGTGGGACGACACCGTCCGCTGGGCGCTCGGCCGGCTCACCCCGGAATACCGGGAAGCGTTCCTCCTCAAGCACGTCGAGGACCTGGAGTACGAGGAGATGGCGCAACTGACGGGCGCGGGGATTTCGGCGTTGAAGATGCGGGTGAAACGCGCCCGCGAGCAGCTGCAGATCATTTTCCGTGAGGCGGAACGTGTTTGA
PROTEIN sequence
Length: 173
VRRVLAGDTGAYAALVARYRDRLGRYAVHMLGDRQDAEEALQDAFVRAHRSLARCDDPERFGAWLYGILVNRCRTTGGRAARRARLFVRDDAALSGVPLPSPAERAEWDDTVRWALGRLTPEYREAFLLKHVEDLEYEEMAQLTGAGISALKMRVKRAREQLQIIFREAERV*