ggKbase home page

13_1_20cm_4_scaffold_964_12

Organism: 13_1_20cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 8574..9263

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BDX6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 189.0
  • Bit_score: 176
  • Evalue 2.30e-41
Putative RNA polymerase sigma-E factor protein {ECO:0000313|EMBL:CDI04014.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" sour UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 187.0
  • Bit_score: 194
  • Evalue 1.50e-46
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 178.0
  • Bit_score: 127
  • Evalue 5.80e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Competibacter denitrificans → Candidatus Competibacter → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGGGCGCAGTGATCGCGATCACCGAGGCGGACGCACTGCGCATGCGTCCGCCTTTGGCCGTGATACGGAAGGGCATCCTGAAAGACCTCGAGCCTCATGCCCTACCGCGCTCGGGTACGCCCGAAGAGGAACTGGCGCTCATCCGCAAAACCGCGCGAGGAGACCGGGCGGCGTTCAAGGCGCTCTACGATCGCTACGCTCCGAGGCTCGGCCGTTACGTGCTCCGGTTGCTCAACCGCAGGGAGATGGTCGGCGAGGTGGTGAACGACGTCATGCTGGTCGCCTGGCAGAGCGCAGCCCGATTCGATCCGCGAGCCTCGCGGCTTTCCAGCTGGCTGTTCGGGATCGCGCACAACAAGGCGCTCAAGGCGCTGGAGCGGATGGGCGCGCGCAAGGAAGACCTGCTCGGCGAGGACGGCGTGGAGGATTTCGCGGCCCGCGACGACCTCGCGCAGGTGCGGACGCCCGAGGAGGTCGCCATCGGACGGCAGGCCGGCGCGGCGCTGACGAGCGCATTGGAAGGCCTCTCGCCGGCTCATCGCTCGGTGATCGAGCTCGCCTTCGCGGAAGATTGCTCCTACCAGGAAATCGCGGAGATCACCGGCTGCCCGCTGAACACCGTCAAGACGAGGATGTTCCACGCCCGCAAGCAGCTCGCGCGGCTCCTCGAAGAGGGGAGCGGGCGATGA
PROTEIN sequence
Length: 230
MGAVIAITEADALRMRPPLAVIRKGILKDLEPHALPRSGTPEEELALIRKTARGDRAAFKALYDRYAPRLGRYVLRLLNRREMVGEVVNDVMLVAWQSAARFDPRASRLSSWLFGIAHNKALKALERMGARKEDLLGEDGVEDFAARDDLAQVRTPEEVAIGRQAGAALTSALEGLSPAHRSVIELAFAEDCSYQEIAEITGCPLNTVKTRMFHARKQLARLLEEGSGR*