ggKbase home page

13_2_20cm_scaffold_1215_20

Organism: 13_2_20cm_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 13574..14530

Top 3 Functional Annotations

Value Algorithm Source
TruB; H/ACA RNA-protein complex component Cbf5p; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Tax=RBG_16_Euryarchaeota_68_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 318.0
  • Bit_score: 511
  • Evalue 9.90e-142
Probable tRNA pseudouridine synthase B n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=TRUB_METKA similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 316.0
  • Bit_score: 340
  • Evalue 1.70e-90
TruB; H/ACA RNA-protein complex component Cbf5p similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 316.0
  • Bit_score: 340
  • Evalue 4.70e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Euryarchaeota_68_13_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 957
ATGACCGACCTCGTCGTCCTCCACGAGGTGCCGGATTCGAAGCATGGGACGAGGCCGGAGGAGCGGTCAATCGGGGAACGGATCCGCCTCGGGGTCGCGATCGTCGACAAGCCCGCGGGGCCGACCTCCCATCAGGTGAGCGCCTGGGTCCGCGACATGTTCGCCGTCCCGAAGGCGGGCCACTCGGGGACCCTCGATCCCCGCGTGACTGGGGTGCTTCCCGTCGCGTTGGCGGACGCGACCCGGGCCGTCGAAGCCGTCCTCGCGGGGGACAAGGAGTACGTCGGCGTGATGCAGCTCCACCAGGACGTCGAGGAGCGACGCGTGCGTTCGATGATGGCGCGGTTCGTCGGGGCGATTTACCAGATCCCACCGGTTCGTTCAGCCGTGAAGCGCGAGCAGCGGACGCGGATCGTGTACGAGCTCGAGCCGATCGAGGTCGACGGGCGAACCATCCTGTTTCGCGTCCGATGTGAATCCGGGACCTATGTACGGACGCTCGCTGCGGACATCGGTGACGCGCTCGGCGTGGGCGGGAACCTCGTCGACCTCCGTCGAACGCGCACGGCGACTTTCGGGGAAGCGGATGCCCATCCGCTCAATGCGTTCCGCGACGCGATTGCGTACTGGAAGGAAGACGGGGACGAAGCCCCGATTCGGTCGCTTCTCCGGCCGATCGAAGATCTCCTTCGTCATCTGCCGCGGATGGTCGTCAAAGACACCGCGGTCGATGCGATCTGTCACGGGGCGAACCTCGCGGTCCCGGGCGTTGCGAAGCTCTCCGCTCACATTCGGTCCGGCGACCTCGTTGGCGTCTTCACGGGAAAAGGCGAGGGGGTGGCGCTCGCGAAGGCCCTCATGACGACGGACGGAATCGTCGTCGCGAAGTCGGGTGTCGCGGCGGACACGGTCCGCGTCCTCATGAATCCGGGCACGTATCCGAAGCTCTGGAAGTGA
PROTEIN sequence
Length: 319
MTDLVVLHEVPDSKHGTRPEERSIGERIRLGVAIVDKPAGPTSHQVSAWVRDMFAVPKAGHSGTLDPRVTGVLPVALADATRAVEAVLAGDKEYVGVMQLHQDVEERRVRSMMARFVGAIYQIPPVRSAVKREQRTRIVYELEPIEVDGRTILFRVRCESGTYVRTLAADIGDALGVGGNLVDLRRTRTATFGEADAHPLNAFRDAIAYWKEDGDEAPIRSLLRPIEDLLRHLPRMVVKDTAVDAICHGANLAVPGVAKLSAHIRSGDLVGVFTGKGEGVALAKALMTTDGIVVAKSGVAADTVRVLMNPGTYPKLWK*