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13_2_20cm_scaffold_2716_11

Organism: 13_2_20cm_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 10680..11378

Top 3 Functional Annotations

Value Algorithm Source
sigW5; ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 187.0
  • Bit_score: 250
  • Evalue 3.00e-63
ECF subfamily RNA polymerase sigma factor id=4197918 bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 210.0
  • Bit_score: 248
  • Evalue 4.80e-63
sigW5; ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 200.0
  • Bit_score: 146
  • Evalue 9.40e-33

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGCGCAGCTAGAAGCGATTCTCGATCCGCGGCACAGCGGCGTCGTTCAAGGGGGGCGGGGAGCGAGTGCTGCCAATGCCGTCATGAGGCAGCACGCTCAGGGGACCGTCCCGAAAGTCGATCGCGATCGCAGACTGGTCGAGGCCCTCCGTCGCGGTGACCCGAACGCAGCGGACCATCTCATCACGACGTACGGTGACCGCGCGTATCGCCTGGCGATTCGTATTACCGGAAACAGGCAGGATGCCGAGGAGGTCGTGCAGGACGCGTTCTGGACGGTGGTCCGGAAGATCGAGACCTTCAGAGGTGAGGCCGCGTTCGGCTCCTGGCTCTATCGGATCATCGCGAACGCCGCCTATCAAAAGATTCGCAGCCGGCGCGGTCGACCGTCCGACCTCTCATTGGACGAGGTGCTGCCGTTTTTCGATGAAGAGGGCCGCCACGTCGCGCCAGGCGCCGACTGGTCCACACGCGTGATTGACGAGTCCCTTCCTCCTGACTTGCGGATCGCGCTGACCTCCGCACTCGACGAATTACCAGCGGACTATCGATCCGTGGTCGTGCTGCGCGACATCGAGGGGTTGTCCAACGTCGAGATCGCCGAAGCCCTGGGCCTCAGTGTTCCCAACGTGAAGACGCGCGTGCATCGCGCCCGGTTGTTCCTGCGGAAGCGGCTAACCGACACGTTAAAGAAGTGA
PROTEIN sequence
Length: 233
MAQLEAILDPRHSGVVQGGRGASAANAVMRQHAQGTVPKVDRDRRLVEALRRGDPNAADHLITTYGDRAYRLAIRITGNRQDAEEVVQDAFWTVVRKIETFRGEAAFGSWLYRIIANAAYQKIRSRRGRPSDLSLDEVLPFFDEEGRHVAPGADWSTRVIDESLPPDLRIALTSALDELPADYRSVVVLRDIEGLSNVEIAEALGLSVPNVKTRVHRARLFLRKRLTDTLKK*