ggKbase home page

13_2_20cm_scaffold_372_9

Organism: 13_2_20cm_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 6081..6497

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit id=24463452 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Xanthomonas axonopodis genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 124.0
  • Bit_score: 84
  • Evalue 1.20e-13
RND family efflux transporter MFP subunit Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 124.0
  • Bit_score: 84
  • Evalue 1.70e-13
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 127.0
  • Bit_score: 81
  • Evalue 2.90e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 417
GTGACCGCTTCTCCGCCAGCGGCCGACCTCTCAAAACTTCGGATCAATCGCGACGACCCGCCGCCCGCGGTTAAGCGGGCGCTGGGTCGTGTGCTGTGGCTGACCAGCGCGGCCGTACTCATCTTCGTCGCGCTCGTTCTCGTCCTGCGGCGGGGCGGCGCGGTTCCGGTGCAGGTGGTGACCGTCTCGACCACAGCCGGCGGTAAAGAGGCGGTAGGAGGCGGTACCGGCGGATCGGTCGCCGTCGTAGCTAACGGCTACGTCGTCGCCCGCACCAAGGCCGCCGTTTCCGCGAAGATTCCAGGCCGGCTTGCCGTGCTCAACGTCAGTGAAGGATCGCGCGTCGAGAAAGGCGCGATCATCGCGCGGCTCGACAATGCCGACTACGACACTGATCGAGACGCAGTCGGACCGTGA
PROTEIN sequence
Length: 139
VTASPPAADLSKLRINRDDPPPAVKRALGRVLWLTSAAVLIFVALVLVLRRGGAVPVQVVTVSTTAGGKEAVGGGTGGSVAVVANGYVVARTKAAVSAKIPGRLAVLNVSEGSRVEKGAIIARLDNADYDTDRDAVGP*