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13_2_20cm_scaffold_4274_5

Organism: 13_2_20cm_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(3802..4278)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor RpoN n=1 Tax=Rhodococcus sp. EsD8 RepID=N1M7K6_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 154.0
  • Bit_score: 137
  • Evalue 1.40e-29
RNA polymerase ECF-type sigma factor Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 157.0
  • Bit_score: 141
  • Evalue 7.80e-31
RNA polymerase sigma24 factor similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 154.0
  • Bit_score: 129
  • Evalue 1.10e-27

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 477
GTGACGCTGCCACCGTTCCAGGCCCTGCTGGACGACCACGCCGAGGCGATCCATCGCTTCCTGGTCGGACTGGTGGGGCCGGCGGAGGCGGAGGACTGCTTCCAGGAGACGTTCCTGGCGGCGCTGCGGTCGTATACGCGGCTCCGGGAGGGATCGAATCTCCGGGCGTGGCTGTTCACCGTGGCGCGGAGCAAGGCAATGGACGCCCACCGGCGCTCGAGACGGGCGCCGGTGCCGGTGGCCGAGCCTCCCGAGCCGCGGCGGAGCGGCAACGGCGGCCATGGGGTCGAGCCCGTAGACGGGGACCTCTGGGCCGCGGTCGCGGCCCTGCCGGAGAAGCAGAGGGCGGCGGTCGTGCTGCGATTCACGTGCGACCTGTCGCATCGCGAGATCGGGCGTGTGCTCGACTGCAGCGACGACGCCGCGCGGCGCAGCGTTCACGAGGGCGTAAAGCGATTGAGAGAGGTTTGGGCATGA
PROTEIN sequence
Length: 159
VTLPPFQALLDDHAEAIHRFLVGLVGPAEAEDCFQETFLAALRSYTRLREGSNLRAWLFTVARSKAMDAHRRSRRAPVPVAEPPEPRRSGNGGHGVEPVDGDLWAAVAALPEKQRAAVVLRFTCDLSHREIGRVLDCSDDAARRSVHEGVKRLREVWA*