ggKbase home page

13_2_20cm_scaffold_6668_11

Organism: 13_2_20cm_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(8268..9515)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J640_NOSP7 similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 413.0
  • Bit_score: 604
  • Evalue 1.00e-169
  • rbh
RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 413.0
  • Bit_score: 604
  • Evalue 2.90e-170
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACC80740.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (str similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 413.0
  • Bit_score: 604
  • Evalue 1.50e-169

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nostoc punctiforme → Nostoc → Nostocales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGCGCCCGGATGCAAACGCTGCCGTCGACGCGGTCTATCGGTCCGATTGGGGCCGGATCGTCGCCACCCTGATCCGGCTGGTTCGCGACTTCGACGTCGCGGAAGAGGCGGCCCAGGAAGCCTTTGCCGCCGCGGTCGACCAGTGGCGGGTCTCCGGCATCCCCGAGTTCCCGCGCGCCTGGATCATCCAGACGGCCCGGCACAAGGCCATCGACCGCATCCGTCGCCGGACGCGGTTCGCGGAGAAGCTGGACGCCTATACCGCGGCGGGGGCGAGCCTGACCGTCGAGGCGCCGGAGTTCGACCCGGGCGACATCCCCGACGATCGCCTTCGCCTGATCTTCACGTGCTGTCATCCGGCGCTGGCGCTCGAGGCCCAGGTCGCGCTCACGCTCCGCACGCTGGGCGGCCTCGAGACGGACGAGATCGCGCGCGCCTTCCTGGTGCCGACCACGACGATGGCGCAGCGGCTGGTGCGTGCGAAGAGCAAGATTCGCGACGCGGGCATTCCGTACGCCGTGCCCGACACGAAGGACATGCCCGCGCGGCTCGACGCCGTGCTGACCGTGATCTATCTCGTGTTCAACGAGGGCTACGCGGCCACCCGCGGCGCGGCGCTCGTCAGGACCGATCTGTGCGCCGAGGCGATCCGGCTCGCGCGTCTCGTGAGAGCGTTGATGGCGTCGCCGCCGCCGGAAGCGACGGCCCTCCTCGCCCTCATGCTCTTGCACGACTCGCGGCGGGACACGCGGCTCGACGAGGCCGGCGACCTCGTCCTTCTCGAGGAGCAGGACCGTCGTCGCTGGAATCACGATCAGATCGCCGAAGCGCTGCCGCTCGTCGACGAGGCCTTGCGCGGCGGCCCCGGTCCCTTCGGGCTCCAGGCGGCCATCGCGGCGTTGCACTGTCAGGCCGCGCGGGCGGAAGATACGGACTGGCCTCAGATCGTCAGGCTGTACGACCTCCTCGAGCGGCTGCAGCCCTCCCCCATCGTCTCCCTGAACCGCGCCGCGGCGGTGGCCATGGCCGACAGCCCGAAGTCGGCGCTCGTCCTGATCGACGCGCTCACCGCGGCCGGCGATCTCGACCGCTATTACCTGCTGCACTCCGCGCGCGCCGATCTGCTGCGGCGGCTGGGATCGTGCGCGGAAGCGGCGAGGAGCTATACGCGGGCGATCGAGCTCTGCACCAACGACGCCGAGCGCCGATTTCTCGCGCGACGGCTCCGCGAGGTCCAGCGACCCTAG
PROTEIN sequence
Length: 416
MRPDANAAVDAVYRSDWGRIVATLIRLVRDFDVAEEAAQEAFAAAVDQWRVSGIPEFPRAWIIQTARHKAIDRIRRRTRFAEKLDAYTAAGASLTVEAPEFDPGDIPDDRLRLIFTCCHPALALEAQVALTLRTLGGLETDEIARAFLVPTTTMAQRLVRAKSKIRDAGIPYAVPDTKDMPARLDAVLTVIYLVFNEGYAATRGAALVRTDLCAEAIRLARLVRALMASPPPEATALLALMLLHDSRRDTRLDEAGDLVLLEEQDRRRWNHDQIAEALPLVDEALRGGPGPFGLQAAIAALHCQAARAEDTDWPQIVRLYDLLERLQPSPIVSLNRAAAVAMADSPKSALVLIDALTAAGDLDRYYLLHSARADLLRRLGSCAEAARSYTRAIELCTNDAERRFLARRLREVQRP*