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OR_08082017_2m_0_2um_scaffold_349

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08082017_2m_0_2um_scaffold_349_trna_2
unknown

Not on your lists

comp(42..114)
-----------------
DNA (73bp)
transferRNA Gly
OR_08082017_2m_0_2um_scaffold_349_1
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(269..2122)
-----------------
DNA (1854bp)
protein (618aa)
Sodium/hydrogen exchanger n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY09_HALNC
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ACX95332.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_349_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2166..3251)
-----------------
DNA (1086bp)
protein (362aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Quinolinate synthetase complex, A subunit n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY08_HALNC
quinolinate synthetase complex subunit alpha
OR_08082017_2m_0_2um_scaffold_349_3
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3321..5111)
-----------------
DNA (1791bp)
protein (597aa)
Aspartate--tRNA ligase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY07_HALNC
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ACX95330.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
aspartyl-tRNA synthetase
OR_08082017_2m_0_2um_scaffold_349_4
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5151..5828)
-----------------
DNA (678bp)
protein (226aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY06_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95329.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_349_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5844..6287)
-----------------
DNA (444bp)
protein (148aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY05_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95328.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_349_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6441..8447)
-----------------
DNA (2007bp)
protein (669aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY03_HALNC
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ACX95326.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_349_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8546..9172)
-----------------
DNA (627bp)
protein (209aa)
HPP family protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY02_HALNC
HPP family protein
HPP family protein {ECO:0000313|EMBL:ACX95325.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_349_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9169..9756)
-----------------
DNA (588bp)
protein (196aa)
CBS domain containing membrane protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY01_HALNC
hypothetical protein
CBS domain containing membrane protein {ECO:0000313|EMBL:ACX95324.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_349_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9872..10066)
-----------------
DNA (195bp)
protein (65aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY00_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95323.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_349_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10144..10809)
-----------------
DNA (666bp)
protein (222aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXZ9_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95322.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_349_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10939..11799
-----------------
DNA (861bp)
protein (287aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXZ8_HALNC
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACX95321.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_349_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11799..13244
-----------------
DNA (1446bp)
protein (482aa)
Cardiolipin synthase A {ECO:0000256|SAAS:SAAS00016767}; EC=2.7.8.- {ECO:0000256|SAAS:SAAS00017006};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Phospholipase D/Transphosphatidylase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXZ7_HALNC
phospholipase D/transphosphatidylase
OR_08082017_2m_0_2um_scaffold_349_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13423..14244)
-----------------
DNA (822bp)
protein (274aa)
Sel1 domain protein repeat-containing protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXZ6_HALNC
Sel1 domain-containing protein repeat-containing protein
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:ACX95319.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_349_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14520..16199
-----------------
DNA (1680bp)
protein (560aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
DNA primase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXZ5_HALNC
DNA primase
OR_08082017_2m_0_2um_scaffold_349_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16311..18128
-----------------
DNA (1818bp)
protein (606aa)
RNA polymerase sigma factor RpoD n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXZ4_HALNC
RNA polymerase sigma-70 subunit RpoD
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_349_trna_1
unknown

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18173..18246
-----------------
DNA (74bp)
transferRNA Met
OR_08082017_2m_0_2um_scaffold_349_16
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18383..19618
-----------------
DNA (1236bp)
protein (412aa)
Membrane protein involved in aromatic hydrocarbon degradation id=1266283 bin=GWE1_Burkholderiales_65_30 species=Prosthecochloris vibrioformis genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
aromatic hydrocarbon degradation membrane protein
Tax=BJP_08E140C01_Burkholderiales_65_30
OR_08082017_2m_0_2um_scaffold_349_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19632..20183)
-----------------
DNA (552bp)
protein (184aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Pseudouridine synthase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVP6_HALNC
pseudouridine synthase
OR_08082017_2m_0_2um_scaffold_349_18
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20285..21277)
-----------------
DNA (993bp)
protein (331aa)
5'-3' exonuclease, N-terminal resolvase-like domain protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVP7_HALNC
5'-3' exonuclease
5'-3' exonuclease, N-terminal resolvase-like domain protein {ECO:0000313|EMBL:ACX96877.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_349_19
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21274..22530)
-----------------
DNA (1257bp)
protein (419aa)
malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (EC:1.1.1.40)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)) {ECO:0000313|EMBL:ACX96878.1}; EC=1.1.1.40 {ECO:0000313|EMBL:ACX96878.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)) n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVP8_HALNC
OR_08082017_2m_0_2um_scaffold_349_20
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22562..24376)
-----------------
DNA (1815bp)
protein (605aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVQ3_HALNC
response regulator receiver modulated diguanylate cyclase/phosphodiesterase
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ACX96883.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_349_21
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24379..26226)
-----------------
DNA (1848bp)
protein (616aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVQ4_HALNC
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ACX96884.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Displaying 23 items

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