ggKbase home page

OR_08082017_2m_0_2um_scaffold_284_5

Organism: OR_08082017_2m_0_2um_Halothiobacillus_neapolitanus_54_650

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 2
Location: 5005..6351

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane efflux protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7VF27_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 36.0
  • Coverage: 444.0
  • Bit_score: 233
  • Evalue 4.00e-58
Multidrug resistance outer membrane protein MdtP {ECO:0000313|EMBL:KFZ90804.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.2
  • Coverage: 427.0
  • Bit_score: 241
  • Evalue 2.10e-60
putative Integral outer membrane protein TolC, efflux pump component similarity KEGG
DB: KEGG
  • Identity: 33.6
  • Coverage: 453.0
  • Bit_score: 220
  • Evalue 7.60e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus prosperus → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1347
ATGCGCGCAGGCGGGTTGCACCGAATTAATCTACCCCAATGGGGGCGGGTGGCCTTTTTGGCCTTAAGCGGGTTGCTCGCAGGTTGCGCGGCCTATCGCCCCTTGGTTTTGCCGCAGCAGCCTGAATTTACGGCCATAACCCCCGCGCAAAGCACACAAGCCATTCAAACGCCGCCCGTGCTTTCTTTAACGACGCTGCAAGCGCTTGTGCTGCACAATAACCCTGAACTTAAAGCGGCCAAATTCGGCGCGGTATTGGCCGCTGCCCGCACGCGCCAAGCGGGCACCTTGCCGGATCCTACTTTTAATTTAACCCGCGATACCCCCTTAAATGGCGTGGGTTTAATTAGTGCGATGAATCAGGCCATTAGCATGGATTTATCGGCCATTATTTCTCGTAAAGACCGCTTAAATGCCGCCAAAGCGGCACAAATTCAGCAAGAATTGAGCTATAGCTGGCTGGCATTAACGACCCAAATTAAAGCCAGCGATTTATATATTCAGCAGGTGGCCAATGGCGCGCAAATCCGCGTTTTAACCGGGGAGCGTGGCGAGCTCAATGCCCGCCTACAGCAAAGTCAGGCGGCCTTGGATCGGGGGTATATCACCCAAGATCGGGTCGTGGCTGATGTGGTGCGCGCGGCAGATTTGGCGCGGCAGGTGGATGTATTGCAACTGACAGCAACCCAAATGCGCCAGCAAATGAATGCTTTGATGGGCGCCGCGCCCGATACGGCGTGGCAAACCCAAGGTTGGCCTAAAATTATCGAGCCTTCTGCCCCCGAGCAATCGGCACGATTGGCGCATTTGGCTTCCCATCGCGCCGATTTGCTGGCTTTGCGGGCGGGGGTGCTGCAAGCCGATGCCCAGTATCGGGCGGCTCTATTGCAGCAGTTTCCCGGTTTAACTTTGGGGGTGAGCCACGCGAACGACACCAGCAACGTGCAAACCGCCGGGTTGAGCTTGGGGTTAACGCTCCCGATTTTTGGCAGTGCCCAGGCGGGGGCGGCATTAGCCCAAGCAACCCGGGCGCAGCTGAATGCCGAGTTGCAGGCACGAATTAACCAAGCGGTGAGTGATGTGGCCTCCGTGCAAAGCACGCTGGCGGCTTATCGGGCGCGCTTAACGCAAATTGAGGCGCGTTTACCGGTGCTCGAAAAAACGGCGGCCAATGCGCAAACGGCGTTAAATGCGGGCTATTTTTCGGCGGGGTCTTATCTCGCGGTGCGCGCCACCTTAACCGCCGAGCAACTCAATGCCATTCAAACGCGCCAAGCCATTATTCAAGCACAGCTGGCCTTGCGGGGTGTGCTCGGCCTAAGCGCTGTACGACACAGATTCGCTTAA
PROTEIN sequence
Length: 449
MRAGGLHRINLPQWGRVAFLALSGLLAGCAAYRPLVLPQQPEFTAITPAQSTQAIQTPPVLSLTTLQALVLHNNPELKAAKFGAVLAAARTRQAGTLPDPTFNLTRDTPLNGVGLISAMNQAISMDLSAIISRKDRLNAAKAAQIQQELSYSWLALTTQIKASDLYIQQVANGAQIRVLTGERGELNARLQQSQAALDRGYITQDRVVADVVRAADLARQVDVLQLTATQMRQQMNALMGAAPDTAWQTQGWPKIIEPSAPEQSARLAHLASHRADLLALRAGVLQADAQYRAALLQQFPGLTLGVSHANDTSNVQTAGLSLGLTLPIFGSAQAGAALAQATRAQLNAELQARINQAVSDVASVQSTLAAYRARLTQIEARLPVLEKTAANAQTALNAGYFSAGSYLAVRATLTAEQLNAIQTRQAIIQAQLALRGVLGLSAVRHRFA*