ggKbase home page

Montesol18_S2p5_coassembly_scaffold_694021_1

Organism: Montesol18_S2p5_coassembly_Bacteroidetes_42_12

partial RP 37 / 55 BSCG 38 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 2..220

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-70 n=1 Tax=Pontibacter roseus RepID=UPI000366A530 similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 70.0
  • Bit_score: 102
  • Evalue 1.00e-19
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 71.0
  • Bit_score: 102
  • Evalue 4.80e-20
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADZ80156.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 71.0
  • Bit_score: 102
  • Evalue 2.40e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobacterium sp. 21 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 219
GATATTGAGGTTAAAGAGAAGAATTTTTCAGCGATGAGTACTTCACTCGACAAGCTAGGCGAACCTTGTCGGAGTATTTTGGAAGACTACTATCTGCGAAATATGACAATGGAAGAGATCACCGAGAAATTCGGATACACTAATTCTGACAATACGAAGAATCAAAAATATAAATGCCTGCAACGATTGAAGAAATTCTTCTTTGAGGCAAACAAATGA
PROTEIN sequence
Length: 73
DIEVKEKNFSAMSTSLDKLGEPCRSILEDYYLRNMTMEEITEKFGYTNSDNTKNQKYKCLQRLKKFFFEANK*