ggKbase home page

SR-VP_26_10_2019_1_90cm_scaffold_26987_1

Organism: SR-VP_26_10_2019_1_90cm_Methanoperedens_44_9

partial RP 6 / 55 BSCG 4 / 51 ASCG 2 / 38
Location: comp(2..2413)

Top 3 Functional Annotations

Value Algorithm Source
UvrABC system protein A n=1 Tax=Thermincola potens (strain JR) RepID=D5XCB4_THEPJ similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 808.0
  • Bit_score: 1063
  • Evalue 0.0
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 804.0
  • Bit_score: 1417
  • Evalue 0.0
excinuclease ABC subunit A similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 808.0
  • Bit_score: 1063
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 2412
ATGTCAGCAGACAAAATCATAATAAAAGGCGCCCGCGTCCACAACCTCAAGAACATAGACCTTGAGCTCCCGAGGAACAAGCTGATAGTGATAACAGGGCTTTCAGGGTCGGGGAAATCATCTCTTGCCTTCGACACATTGTATGCCGAAGGACAGCGCAGGTATGTCGAATCGCTGTCAGCCTACGCCAGGCAGTTCCTGGGGCAGATGGACAAACCTGATGTTGAATATATCGAAGGTTTATCGCCTGCCATCTCCATCGAGCAGAAATCCACGAGCAAGAACCCCCGTTCGACGGTAGGTACAGTCACGGAGATATACGATTACCTGCGCCTTCTGTATGCAAGGATAGGGAAGCAGCACTGCCCCAACTGCGGCAGTGAGATTGCGCCGCAGACAGTGGAGCAGATTGTAGGGAGGGTGATGGCACTTGCCGAGGGCACGAAAATACACATACTCGCTCCGCTCTCCAGACAGAGGAAAGGCGAATACAAGCAGATGTTCGAGGACCTTGCCAAATCAGGCTTTGCCCGTGTTCGTATTGACGGCAAAATGCATGAACTCTCAGAAGAAATAATCCTTAACAAGCAGCAGAAGCACGATATTGACGTTGTGGTGGACAGGCTGGCAATAAAAGCCGGGATAGGGGAACGACTTTCCGATTCTGTGGCTACAGCCCTGAAAGAGGGAAACGGCATTGTGGTAGTGGATGTCATCGGAGGCAAGGAGCTTCTCTTCAGCGAGCATGCCGCATGCGCGAAATGCGGGATCAGTTTTGAGCCGCTTGAACCCAATATGTTCTCCTTCAACAGCCCGAGAGGTGCATGTCCATCATGCCAGGGGCTTGGAAACACGATGGAATTCGACCCCGACCTCATAGTACCCGATAAAAGTAAATCCATAAGCCAGGGAGCCATTGAGCCGTGGGGGGACTATGGATATTACCGCCAGATGCTCGCATCCGTTGCAAAACATTACGGCTTCTCACTCGATACCCCATTCTCGGAATTGAAACCCGAGCATGTGCGCGTGATACTGCACGGGGGAAGCGAGCAGATCCTTTTCAGGTACGTGCCGCGCGACCGCGACGGGCTCTGGGAACACTGGAGCAGTTTTGAAGGGGTAATTTCCCATCTGGCAAGAAAATACAGGGAATCCCAGTCCGAAGATGCACGGGAGAATATCCAGCAATACATGAGCATCAAACCCTGTACCGTGTGCAATGGAGAGCGGCTCAAACCCTCCAGCCTCGCGGTCACGATTGCGGATAAATCCATCATTGCCACAACCCGTTTGTCCGTGAAAAAAGCACTGGAGTTTCTTGATACCATCAAGTTCAGTCAAAAAGAGGCAATAATCTCAAAGCCCATTATGAAGGAGCTTCGTGCAAGACTTGGATTCCTTATGGATGTCGGTCTTAATTACCTCACGCTTGACAGGGCGGCTGGCACCCTCTCAGGCGGCGAAAGCCAGAGAATACGGCTTGCCACGCAGATAGGCTCAAGCCTTGTCGGTGTGCTTTACATTCTGGACGAACCCAGCATCGGTCTCCATCAGCGGGATAACGGAAGGCTGATACATATGCTAACGCAGCTTCGCGACCTCGGGAACACGGTAATAGTAGTGGAGCACGACGAGGAGATGATAAGGAGCGCAGATTTTATCGTGGATATGGGACCGGGAGCGGGAGTGCACGGCGGGGAAGTCGTGGTGACGGGAAGCCAGGAAGATGTGATCGGATGCGAAAATTCACTTACAGGGAAGTATCTCAGCCATGAGAAGGTGATAACTATACCGGCGAAGAGAAGAAGACCGAATGGTAAAATAACCATCGTGGGGGCGGGCGAGAATAACCTCAAGCAGATAGACGTCACCATACCTCTTGGTGTGATGACCGCAGTCACGGGTGTATCAGGCTCGGGCAAGAGCACGCTTGTGAACGACATTCTTTACAGGGCGCTGGCGCAGAAATTCTACCATGCAAAAGAAAAGCCAGGGAAGCACAGGGGTATCATAGGGCTGGAAAATATAGATAAAGTTATAATAATAGACCAGTCCCCGATCGGCAGGACGCCGCGTTCAAACCCTGCCACGTACACCGGTATATTCACTCCGGTACGGGATTTATTTGCCAAACTTCCTTCATCAAAGGCGCGGGGTTATCTACCCGGGAGGTTCAGTTTCAATGTCAAGGGAGGGAGATGCGAAGCATGCGGCGGGGACGGGATTATCACCATCGAGATGCATTTCCTTCCCGATGTTTATGTGCCGTGCGAGGTTTGCCACGGGAACCGTTTCAACAGCGAGACGCTTGAAATCACATACAAAGGCAGGAATATAGCGCAGGTGCTGGACATGACGGTGGAGGAAGCGCTTACGTTTTTTGAGAATATTCCCAAAATAAAACGCCAG
PROTEIN sequence
Length: 804
MSADKIIIKGARVHNLKNIDLELPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGQMDKPDVEYIEGLSPAISIEQKSTSKNPRSTVGTVTEIYDYLRLLYARIGKQHCPNCGSEIAPQTVEQIVGRVMALAEGTKIHILAPLSRQRKGEYKQMFEDLAKSGFARVRIDGKMHELSEEIILNKQQKHDIDVVVDRLAIKAGIGERLSDSVATALKEGNGIVVVDVIGGKELLFSEHAACAKCGISFEPLEPNMFSFNSPRGACPSCQGLGNTMEFDPDLIVPDKSKSISQGAIEPWGDYGYYRQMLASVAKHYGFSLDTPFSELKPEHVRVILHGGSEQILFRYVPRDRDGLWEHWSSFEGVISHLARKYRESQSEDARENIQQYMSIKPCTVCNGERLKPSSLAVTIADKSIIATTRLSVKKALEFLDTIKFSQKEAIISKPIMKELRARLGFLMDVGLNYLTLDRAAGTLSGGESQRIRLATQIGSSLVGVLYILDEPSIGLHQRDNGRLIHMLTQLRDLGNTVIVVEHDEEMIRSADFIVDMGPGAGVHGGEVVVTGSQEDVIGCENSLTGKYLSHEKVITIPAKRRRPNGKITIVGAGENNLKQIDVTIPLGVMTAVTGVSGSGKSTLVNDILYRALAQKFYHAKEKPGKHRGIIGLENIDKVIIIDQSPIGRTPRSNPATYTGIFTPVRDLFAKLPSSKARGYLPGRFSFNVKGGRCEACGGDGIITIEMHFLPDVYVPCEVCHGNRFNSETLEITYKGRNIAQVLDMTVEEALTFFENIPKIKRQ