ggKbase home page

SR-VP_26_10_2019_1_90cm_scaffold_27002_3

Organism: SR-VP_26_10_2019_1_90cm_Methanoperedens_44_9

partial RP 6 / 55 BSCG 4 / 51 ASCG 2 / 38
Location: comp(1163..2263)

Top 3 Functional Annotations

Value Algorithm Source
mRNA 3-end processing factor n=2 Tax=Methanosarcina mazei RepID=M1PD05_METMZ similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 363.0
  • Bit_score: 411
  • Evalue 8.70e-112
Putative exonuclease of the beta-lactamase fold involved in RNA processing {ECO:0000313|EMBL:KCZ70654.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 366.0
  • Bit_score: 568
  • Evalue 6.00e-159
mRNA 3-end processing factor similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 363.0
  • Bit_score: 411
  • Evalue 2.50e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1101
GTGATAATTTCCCACGGCCACCTTGACCACTGCGGGCTTGTACCCAACCTCATGGACCTTGAACCTGAAACATATTGCACAGACTTGACAGCCCGCTTATCAGCGCTCCTCGCAAGAGATACACTCAAAATAGCAGAGAAGAAAGGTCACGTCATTCCTTATTATACAGACGAGATCCAGGAATTCGAGCGAAAAGCTAGGACAATCAAGTACAAACAGGAAATCAAGACATCAGGTTATCATGCGACTTTTTACGATGCAGGACATATTCCAGGCTCATCCTCGGTCTATCTTGAAAAAGACAAGCAGAGCCTGTTCTATACAGGAGACATAAACACAATCGAGACAGAACTGCAGAAAGGCGCGGACACAGAATATCCAGAGAGCAACATACTGATGATAGAGAGTACGTACTTTGGAAAAAACCATACTCCAAGGAAGATACTGGAAGAGCGGTTTATAGAATCCATAAGCGAGACCATTGAGAGCGGTGGAAAAGCAATAATTCCCGCTTTCAGCATAGGAAGGACGCAGGAGATGATGCTGATACTGAAAAAACACGGGCTCCATGCGTACGTGGACGGCATGGGTGTGGATGTCTTCGACATCATAAAAAGAAAGCCGCAATCTGTTCGTGACATGAATAAACTTGAAAAGGCATTCAGCAGTTCCAGTATAGTAAAGCCGGAAGAGCGGGCGGCTATCATCAAAGAACCATGCATCATCGTGACCAGCGCAGGCATGCTGAACGGGGGTCCTGTGCTTTATTACCTGAGGGAAATACACGACGACCCGAAATCGAAGCTCCATCTCACAGGCTACCAGGCAGAGGATACAAACGGGAGAAGGGCGCTGCAAAGCGGGTATATTGAGGATGGAAGGGATACGCTGAAGCTCAATTGCAGGCTTGAGCAGTACGATTTCTCTGCTCACTGCGGGGATAAGGAATTAAAGGAAGTGGTGAAGAAATTCGCAGATAATGGCACGGAAACTGTTTTTGCGGTGCACGGGGAAAATACCCAGGGCTTTGCGGAATGGATAGGGGAAGAGCTCGATGTGGAATCGAAAGCTCCAGCCAATGGGGATAGGATATATATATGA
PROTEIN sequence
Length: 367
VIISHGHLDHCGLVPNLMDLEPETYCTDLTARLSALLARDTLKIAEKKGHVIPYYTDEIQEFERKARTIKYKQEIKTSGYHATFYDAGHIPGSSSVYLEKDKQSLFYTGDINTIETELQKGADTEYPESNILMIESTYFGKNHTPRKILEERFIESISETIESGGKAIIPAFSIGRTQEMMLILKKHGLHAYVDGMGVDVFDIIKRKPQSVRDMNKLEKAFSSSSIVKPEERAAIIKEPCIIVTSAGMLNGGPVLYYLREIHDDPKSKLHLTGYQAEDTNGRRALQSGYIEDGRDTLKLNCRLEQYDFSAHCGDKELKEVVKKFADNGTETVFAVHGENTQGFAEWIGEELDVESKAPANGDRIYI*