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SR-VP_26_10_2019_2_100cm_scaffold_5096_5

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_44_46

near complete RP 28 / 55 MC: 5 BSCG 21 / 51 MC: 1 ASCG 32 / 38
Location: 3705..4784

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine 13 synthase (EC:4.2.1.-) similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 361.0
  • Bit_score: 439
  • Evalue 4.90e-121
Probable tRNA pseudouridine synthase D n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=TRUD_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 361.0
  • Bit_score: 437
  • Evalue 1.10e-119
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67 similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 358.0
  • Bit_score: 551
  • Evalue 7.40e-154

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Taxonomy

BJP_08E140C01_10KDA_Methanosarcinales_43_67 → Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1080
TTGAGGATAAGCCAGCAGAGGTTCGGCTGGGCAGGGACCAAGGATAAGCGCGCTCTCACAAAACAGAAAATAAGTATATGGGATGTGGGCGAAGAGGACTTATCGCGCATCCGTTTAAAGGATGTGGAGTTAAAACCAATCGGCCGCTCAAATAAAAAAATAAGCCTTGGTGACCTGTGGGGCAATCGTTTCAAAATAACAATAAGAGATATCGGATTATCACAGGATGAGACGCTTTCACGGGTAAAAGCCGCAACATTGGAGCTTCTTCTGGGCGCGCCGAATTTCTTTGGCGTGCAGAGGTTCGGTGAGATGCGCCCGGTGACGCATGTGGTGGGCGAAGCTATCGCGCGGGGTAATTTCAGGGATGCGGCGCTTACGTATATAGCAAGAGTTTTTCCAGATGAATCAGATGAAATTAAAAAAGCGCGCCAGTTTGTAGAGGAGACGGGCGACTATAAAGAGGGGCTGAAGCTTTACCCTTTGCGTCTCCAGTTCGAGAGGGCTATGATGAACCACCTGATTGCGTATCCTGACGATTATTCAGGGGCTTTCAAAAAATTATCCCCGAAATTACAGGCGATGTTCCTGCACGCGTACCAATCGTATATCTTCAATATTATCCTCAGCCGCCGGATTGCATCCGGGCTGTCGATACATGAGGCGTATGACGGGGACATCGTGTGTTTCAAGAACGAAATGGGTCTGCCTGATACTTCGCGGCTCCAGAAGGTCACGAAGGATAACCTGGACGGGATAAATAATCTCATTAACAGGGGGCGGGCATTTGCCACTGCGCCGCTTGTGGGGTATGAAACACAGTTTGCAGAGGGCGCGCCGGGTGAGATTGAGCGGGCTGTGGTGAGAGAGTTAAATGTGGAGCCTGAGGGTTTCAAAGTCCCTGATATGCCTGAATTGTCGTCAAGAGGATTGCGAAGGGAGATTATTTTGTCTTTCAAGCCTGAATTCAGAGTTGAGGAGGATGATGTTAATGTTGGGAAGATTAAAGTCACGCTTGAGTTTTCTTTGCAGAAGGGGAGTTATGCGACCATTGTTTTGAGGGAGTATATGAAGCTATAG
PROTEIN sequence
Length: 360
LRISQQRFGWAGTKDKRALTKQKISIWDVGEEDLSRIRLKDVELKPIGRSNKKISLGDLWGNRFKITIRDIGLSQDETLSRVKAATLELLLGAPNFFGVQRFGEMRPVTHVVGEAIARGNFRDAALTYIARVFPDESDEIKKARQFVEETGDYKEGLKLYPLRLQFERAMMNHLIAYPDDYSGAFKKLSPKLQAMFLHAYQSYIFNIILSRRIASGLSIHEAYDGDIVCFKNEMGLPDTSRLQKVTKDNLDGINNLINRGRAFATAPLVGYETQFAEGAPGEIERAVVRELNVEPEGFKVPDMPELSSRGLRREIILSFKPEFRVEEDDVNVGKIKVTLEFSLQKGSYATIVLREYMKL*