ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SR-VP_26_10_2019_2_100cm_scaffold_2952_9

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_44_46

near complete RP 28 / 55 MC: 5 BSCG 21 / 51 MC: 1 ASCG 32 / 38
Location: 9286..9915

Top 3 Functional Annotations

Value Algorithm Source
Proteasome subunit beta n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KX12_METHD similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 209.0
  • Bit_score: 305
  • Evalue 2.30e-80
proteasome endopeptidase complex, archaeal, beta subunit similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 209.0
  • Bit_score: 305
  • Evalue 6.40e-81
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 209.0
  • Bit_score: 384
  • Evalue 9.20e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sequences

DNA sequence
Length: 630
ATGGATAACATGGAATACAAAGGAACCACCACAATAGGGTTAGTTTGCGATAAAGGCGTAGTTATGGCTTCAGAAAGAAGGGCGACAATGGGACACTTTATTGCAAGTAAAGATGCAAAAAAGGTTTACCAGATTGACGACCTTATAGCAATGACCACAGCCGGTTCGGTAGGGGATGCGCAAAGACTCGTAAAATGGATGCAGGTAGAATCAAAACTTTATAAAATGCGCAGGGAAGAACCCATGACCGTGAAAGGAATAGTAAGCCTGCTTGCAAATATCTTAAGCGGCAACAGATATTTCCCATATTATGTACAGCTTCTTGTAGGCGGGGTTGACAAAAATGGGCCAGGCGTTTATTCACTTGACGCAATAGGCGGGATAATCGAAGAAAAAAAGGCAGTATCAACAGGCTCGGGCTCGCCAATGGCTTACGGCGTGCTTGAAGACAGATATACACCAAATATGCCGATTGATGAAGGGGTCGAACTTGCAGTACGCGCATTGCACAATGCCATGAAGCGTGATTCTGCATCCGGTGATGGTATCAGTGTAGTAAAAATCACTGCCGAGGGGTATTTTGAGATAGAGGACGCCGAAATTAAGAAATTGCGCGATTCCTTTACCTAA
PROTEIN sequence
Length: 210
MDNMEYKGTTTIGLVCDKGVVMASERRATMGHFIASKDAKKVYQIDDLIAMTTAGSVGDAQRLVKWMQVESKLYKMRREEPMTVKGIVSLLANILSGNRYFPYYVQLLVGGVDKNGPGVYSLDAIGGIIEEKKAVSTGSGSPMAYGVLEDRYTPNMPIDEGVELAVRALHNAMKRDSASGDGISVVKITAEGYFEIEDAEIKKLRDSFT*