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SR-VP_26_10_2019_2_100cm_scaffold_4129_23

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_44_46

near complete RP 28 / 55 MC: 5 BSCG 21 / 51 MC: 1 ASCG 32 / 38
Location: 15580..15744

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component Rrp4 n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KY66_METHD similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 55.0
  • Bit_score: 75
  • Evalue 1.70e-11
RNA-binding protein Rrp4 (containing S1 domain and KH domain) similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 55.0
  • Bit_score: 75
  • Evalue 4.80e-12
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 55.0
  • Bit_score: 101
  • Evalue 3.10e-19

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Taxonomy

Sequences

DNA sequence
Length: 165
ATGGATAAAAAATTAGTAATACCAGGCGAATTCCTTTCAGACGATGTAAATCTTGCTGATGAGGGCACATATGTGGAAGAAGGCAAAGTATTCTCATCGGTTTTCGGTATCGCATCGTTGAAAAACCATGTCAGGGTCGTCCCGCTTTCGGGTAAATATATACCA
PROTEIN sequence
Length: 55
MDKKLVIPGEFLSDDVNLADEGTYVEEGKVFSSVFGIASLKNHVRVVPLSGKYIP