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SR-VP_26_10_2019_2_100cm_scaffold_9040_3

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_44_46

near complete RP 28 / 55 MC: 5 BSCG 21 / 51 MC: 1 ASCG 32 / 38
Location: comp(1285..2277)

Top 3 Functional Annotations

Value Algorithm Source
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01081}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 328.0
  • Bit_score: 540
  • Evalue 1.60e-150
Probable tRNA pseudouridine synthase B n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMQ1_METH6 similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 328.0
  • Bit_score: 433
  • Evalue 1.90e-118
putative tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 328.0
  • Bit_score: 433
  • Evalue 5.50e-119

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 993
ATGATTCTGCCTTCAGAGAAAAAAAGAGAGAAACTTGTAAAATCGGAAGACGTGACCGACGGGAAGTACGGAAAAAAACCGGAGGTGCGTCCCCTGGAGGAATATATCAGGAAAGGTGTGATTAACCTTGATAAGCCCGCCGGCCCCACAAGCCATGAAGTGACCTCATGGGTCAAGAAAATCCTGAATCTGGATAAAGCAGGGCACAGCGGCACGCTTGACCCGAACGTTACAGGGCTTCTTCCAATTATGCTAAGCGAGGCGACAAGAGCGGTGGATGCGCTTCTCACGGCTGGGAAAGAATACGTCTGCCTCATGAAACTCCATACCGCAATGCCTGAAAAGATAATAAAAAGCATTTTTAGCGATTTTACAGGTGAAATATTCCAGAAGCCTTCAATCAAATCGGCTGTAAAACGTGAAACAAGAGTGAGAACTATCTATTATCTTGAGCTTCTTGAGGTTGAGGATAATAATGTCCTTTTTAAGGTCGGATGTGAAGCAGGGACGTATATCCGCAAATTATGCCATGACATCGGAATGGCGCTTGGCACTGGCGCGCACATGCAGGAACTCAGGCGCACAAAGAGCGGTCCTTTCAGGGAGGATGAGAAACTGGTTACGCTCCAGGACCTGCGGGATGCGTATGTCGAATGGCAGGAGAGCGGGGATGAGACGCAGCTGCGAAAGGTTATCAGTCCTATGGAATTCGGTCTTTCCCATCTTCCTGAAATAGTTATTCGTGATAATGCAGTGGATGCGATTTGCCACGGCGCGGGTCTAGCTGCCCCGGGTGTGCTGACGGTTGAAACGGGAATAGAAAGGGGAGACCTTGTTGCTGTTTTTACGCTAAAAGGCGAGGCTGTATCGTTCGGCATCGCGCAGATGAAGTCCAATGAAATATTGAGGGCCGCTACGGGTATTGTAGCAAACACAGACCGCGTGCTTATGGAAGTCGGCACGTATCCAAAGGGATGGAAAGCAAAAGCATAA
PROTEIN sequence
Length: 331
MILPSEKKREKLVKSEDVTDGKYGKKPEVRPLEEYIRKGVINLDKPAGPTSHEVTSWVKKILNLDKAGHSGTLDPNVTGLLPIMLSEATRAVDALLTAGKEYVCLMKLHTAMPEKIIKSIFSDFTGEIFQKPSIKSAVKRETRVRTIYYLELLEVEDNNVLFKVGCEAGTYIRKLCHDIGMALGTGAHMQELRRTKSGPFREDEKLVTLQDLRDAYVEWQESGDETQLRKVISPMEFGLSHLPEIVIRDNAVDAICHGAGLAAPGVLTVETGIERGDLVAVFTLKGEAVSFGIAQMKSNEILRAATGIVANTDRVLMEVGTYPKGWKAKA*