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SR-VP_26_10_2019_2_100cm_scaffold_7925_3

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_44_46

near complete RP 28 / 55 MC: 5 BSCG 21 / 51 MC: 1 ASCG 32 / 38
Location: 876..1397

Top 3 Functional Annotations

Value Algorithm Source
Holliday junction endonuclease RuvC {ECO:0000313|EMBL:KCZ73526.1}; EC=3.1.22.4 {ECO:0000313|EMBL:KCZ73526.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 155.0
  • Bit_score: 242
  • Evalue 2.70e-61
Holliday junction endonuclease RuvC n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YZN5_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 155.0
  • Bit_score: 215
  • Evalue 3.30e-53
ruvC; Holliday junction resolvase similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 155.0
  • Bit_score: 203
  • Evalue 2.80e-50

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 522
ATGATTGTTATCGGAATTGATCCCGGGCTTGCGACAGTGGGCTTCGGGGTCATAAGAACCGAGAAAAACAATATAACTCCTGTAAGCTATGGCGCCATTCGGACATCGGCTGAAAAACAAGCTCCCCAACGCCTGCTGGAAATATACACCGGCGTAAGCGAGCTTTTTGTGAAATACGTACCTTCAGCCGTGGCGGTTGAAAAACTTTTTTTCAATAAGAATGTTACAAACGCCATGAGCGTGAGCGAAGCAAGGGGCGTTATAGTCCTGGCTGCAGAGCAAAATCATATACCCGTATTTGAATATACCCCGAACGAAGTCAAGCAGGCAATAACGGGTTCGGGGCGGGCTGATAAGAAACAGATGCAGGTGATGATTAAGAGGCTGTTGAACTTAAGCGAGATACCAAGACCTGATGATGCGGCGGACGGGCTTTCGATTGCTTTATGTCATATAAATATAATGACTACCCGGGTAAACGGCTCTATTTCAACGAGAATAAAATCGACAACTTTATCTTAA
PROTEIN sequence
Length: 174
MIVIGIDPGLATVGFGVIRTEKNNITPVSYGAIRTSAEKQAPQRLLEIYTGVSELFVKYVPSAVAVEKLFFNKNVTNAMSVSEARGVIVLAAEQNHIPVFEYTPNEVKQAITGSGRADKKQMQVMIKRLLNLSEIPRPDDAADGLSIALCHINIMTTRVNGSISTRIKSTTLS*