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SR-VP_26_10_2019_2_100cm_scaffold_494_11

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_43_60

partial RP 26 / 55 MC: 7 BSCG 21 / 51 MC: 2 ASCG 27 / 38 MC: 2
Location: comp(8501..9286)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit D (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 263.0
  • Bit_score: 309
  • Evalue 5.50e-82
DNA-directed RNA polymerase subunit D n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=RPOD_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 264.0
  • Bit_score: 307
  • Evalue 1.30e-80
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 261.0
  • Bit_score: 440
  • Evalue 1.00e-120

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Taxonomy

Sequences

DNA sequence
Length: 786
ATGGATATTGACATAATAGAATTGTCAGACCGCAAAGCCAGATTTATTTTATCTGGCGTCTCGACATCTTTTGCCAACGCATTCCGAAGGAGCGTACTTGCGGAAGTTCCGGTACTGGCTATTGATGATGTTAATATCTATGAAAATACCTCTGTCCTTTTTGATGAACAGCTCTCTTTGAGACTGGGTTTGATCCCCCTGAAAACCGATACGAAATCCTATACTCTCCGTGAAGAATGTTCCTGCAAAGGCGCAGGTTGCACGCAATGCCAGGTCTCATTGACCCTGAGCGCCGAAGGTCCTAAGATTGTGCATTCAGGCGATATGGTTTCCACAGACCCTGAGGTGCGCCCGGCTGATGCGACAGTACCCATTATCGAGCTTAAAGAGAAACATAAGGTCGTAGTGGAAGCAATCGCAAGGCTCGGAACAGGCAGGGATCACAGCAAATGGCAGGCCGGCGTTGCAAGCGGGTTCAAAAATATGCCCATTATAACGATCGGAAACTGCGATTATTGCGGCAAATGTGTAGAAGTATGTCCCCGGGATATCTTGAAAATGGAAGGGAATAAGGTAAAAGTTGTAGACATTATCGAATGTTCAATGTGCAGGTTGTGTGAAGAAGCATGTGATATGGATTCCATTAAGGTAAGTTCAAATCCTGAATCCTTCGTAATGACATTTGAGACTACAGGCGCCCTCACAGCTACTGAACTTGCTCTTGAGGCTGTGGGCAGTATCAGGAAAAGAGCCGAACAATTAGGTGAGATACTTAATACCCTTTGA
PROTEIN sequence
Length: 262
MDIDIIELSDRKARFILSGVSTSFANAFRRSVLAEVPVLAIDDVNIYENTSVLFDEQLSLRLGLIPLKTDTKSYTLREECSCKGAGCTQCQVSLTLSAEGPKIVHSGDMVSTDPEVRPADATVPIIELKEKHKVVVEAIARLGTGRDHSKWQAGVASGFKNMPIITIGNCDYCGKCVEVCPRDILKMEGNKVKVVDIIECSMCRLCEEACDMDSIKVSSNPESFVMTFETTGALTATELALEAVGSIRKRAEQLGEILNTL*