ggKbase home page

SR-VP_26_10_2019_2_100cm_scaffold_387_3

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_43_60

partial RP 26 / 55 MC: 7 BSCG 21 / 51 MC: 2 ASCG 27 / 38 MC: 2
Location: 564..1094

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=5 Tax=Dehalococcoides mccartyi RepID=RIMM_DEHSB similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 163.0
  • Bit_score: 153
  • Evalue 1.20e-34
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 163.0
  • Bit_score: 153
  • Evalue 3.40e-35
Tax=RBG_13_Chloroflexi_54_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 169.0
  • Bit_score: 171
  • Evalue 1.00e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Chloroflexi_54_9_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 531
ATGGCTAACACAAGCTCTGATAAAAACTCGCAGGGTAAAGAGACGGAATACATCACCGTAGGGGAGGTGCTGGGGGCGTGGGGCCTCAAAGGAGCTTTCAGGGTGAGGCCCACCACCGATTTCCCGGAACGATTCAAGTCCGGCGAAACACTCTTCATCGAAGGCGCTCCTTTTTCCATCCTCACCTCGAACTTTCAAAAAGACGGAGTGATAATCACCATCTCCGGAGTAGATACCCCGGAAGCCGCCGCCAAACTGCGCCGCAAGACGATGGACATACCCGCGAGCGAACTGCGCGCGCTGCCGGAAGGACGGTACTACCAGTTCGACATCATCGGATTGGAAGTGCAGACTGTGGACGGCGCAATCCTGGGCAAGGTAACGGATATACTGAATTGCGGCAATGACGTTTACGTGGTGAAGGGAGAGGGCAAAGAAGTCCTAATCCCGGCCACCAAAGACGTGGTCAAAAGCATCGACGTCAAAAAAGGCAAAATGGTCATTGAACCGATAGAGGGGCTGCTGGGATAG
PROTEIN sequence
Length: 177
MANTSSDKNSQGKETEYITVGEVLGAWGLKGAFRVRPTTDFPERFKSGETLFIEGAPFSILTSNFQKDGVIITISGVDTPEAAAKLRRKTMDIPASELRALPEGRYYQFDIIGLEVQTVDGAILGKVTDILNCGNDVYVVKGEGKEVLIPATKDVVKSIDVKKGKMVIEPIEGLLG*