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SR-VP_26_10_2019_2_100cm_scaffold_387_19

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_43_60

partial RP 26 / 55 MC: 7 BSCG 21 / 51 MC: 2 ASCG 27 / 38 MC: 2
Location: 18118..18396

Top 3 Functional Annotations

Value Algorithm Source
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:KCZ70693.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 87.0
  • Bit_score: 143
  • Evalue 1.20e-31
transcription regulator id=24620935 bin=Halonotius_J07HN6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halonotius_J07HN6 similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 86.0
  • Bit_score: 73
  • Evalue 1.10e-10
transcriptional regulator, AbrB family similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 89.0
  • Bit_score: 60
  • Evalue 1.60e-07

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 279
ATGAATGCCACAATTGATATGGTAACTATATCCTCAAAAGGTCAGATAGTAATTCCCAAAAAGATCCTGAAGGCCCTTGGATTGAAAGAGCAAGATAAGTTATTGTTATTCAATAAAGGCGAAAACATTCTTTTGAAAAAAGTTAAACCTGAGATGTTTGAGAAAAATATAAGGGACATGTTAGCCCCAATTCGTGAGGAAGCAGAAGCAAAGGGATTGACAGAAAGAGATGTAGAAACTGAGATAAAAGCACATAGAGCACAAAAAGTCCAGGCATGA
PROTEIN sequence
Length: 93
MNATIDMVTISSKGQIVIPKKILKALGLKEQDKLLLFNKGENILLKKVKPEMFEKNIRDMLAPIREEAEAKGLTERDVETEIKAHRAQKVQA*