ggKbase home page

SR-VP_26_10_2019_2_100cm_scaffold_2400_1

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_43_60

partial RP 26 / 55 MC: 7 BSCG 21 / 51 MC: 2 ASCG 27 / 38 MC: 2
Location: 3..1223

Top 3 Functional Annotations

Value Algorithm Source
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:KCZ72001.1}; EC=3.1.21.3 {ECO:0000313|EMBL:KCZ72001.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 304.0
  • Bit_score: 570
  • Evalue 1.00e-159
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFG5_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 297.0
  • Bit_score: 496
  • Evalue 1.80e-137
HsdR family type I site-specific deoxyribonuclease similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 297.0
  • Bit_score: 456
  • Evalue 5.70e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1221
CGCGCCCCCGATGCGCCGCCTGAAATATCGGCCGAGCTCCGCACCAGGCCGATCGCGGAATTCGACCCCAAGAACGGTCATCTGGCGGCGCTCGAGCGCGACACGCTGGACAGCTACGGAGAGTACATCGCTGCATTTCCCGACGACCCTCTGGCCGCGCGGACGCGAGCGCTCGCCGCTGCCCGGCGTGAGGCGATCACTTGGCACGCAAGCTGCCGTGTCGATAACGCAGATGCGTATTGGTCCTACTTGCAAGAGCCGGCGCGTCTTCTTGATATTGTCGAGAATTTCACGCTATTCAGCGAAGCAAGCGGCGGGATTGTGAAGCTGGTTGCGAAGAACCACCAGTACCTTGGTGTGAACAATGCCACCGAGGCATTGAAGCAGATTGAACAGAACTGGGGGCGCCTCGGTGTTTTCTGGCACACGCAGGGCAGCGGGAAAAGCTACTCCATGGTATTCTTCTCCCAGAAAGTTCTTCGAAAAATTCCCGGTAATTTCACGTTCGTTATCGTGACCGACAGGCAGGATCTGGACAACCAGATATACAAGAACTTTGCCGGCGCTGGCGCTGTGACTGAGGAGCAGGTGCAGACAGAGAGCGGAGAACACCTAAAGCAGCTGCTGCGAGAAGACCACCGCTACATATTCACGCTAATACAAAAATTCCACAAAAAGAAGGGCGAAACCTATCCTATGCTTTCAGCCCGCAAAGATATCATTGTCATCACGGATGAGGCACACCGCAGCCAGTACGATGCCCTTGCCCTGAACATGCGAAATGCCCTTCCAAACGCAGCATTCATCGCCTTCACAGGCACACCTCTCATTATCGGTGAAGAAAAGACAAAAGAGGTTTTCGGGGACTATGTCAGCATCTACAACTTCAAGCAGTCAGTAGATGACGGCGCCACGGTTGCGCTTTATTATGAGAACCGCATCCCTGAACTTCAGCTTACCAACAGGGAGTTGAATGAAGACCTGCAGCGCGTCATCGAAGAGGCAGAACTGGATGAAGAGCAGGAGAATAAACTTGAGCGTGAGTTCGCGCGTGAGTACCACCTGATTACAAGAGATGACAGGCTGGAGAAGATAGCCAGGGATATTGTCGCTCATTTCATGGGACGCGGACAATTTGGGAAAGCATGGTCGTCTCCATTGACAAAGCAACGGCTGTTCGGATGTACGATAAGGTGCAGAAGTATTGGAAAAATTACTTAA
PROTEIN sequence
Length: 407
RAPDAPPEISAELRTRPIAEFDPKNGHLAALERDTLDSYGEYIAAFPDDPLAARTRALAAARREAITWHASCRVDNADAYWSYLQEPARLLDIVENFTLFSEASGGIVKLVAKNHQYLGVNNATEALKQIEQNWGRLGVFWHTQGSGKSYSMVFFSQKVLRKIPGNFTFVIVTDRQDLDNQIYKNFAGAGAVTEEQVQTESGEHLKQLLREDHRYIFTLIQKFHKKKGETYPMLSARKDIIVITDEAHRSQYDALALNMRNALPNAAFIAFTGTPLIIGEEKTKEVFGDYVSIYNFKQSVDDGATVALYYENRIPELQLTNRELNEDLQRVIEEAELDEEQENKLEREFAREYHLITRDDRLEKIARDIVAHFMGRGQFGKAWSSPLTKQRLFGCTIRCRSIGKIT*