ggKbase home page

SR-VP_26_10_2019_2_100cm_scaffold_7353_4

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_43_60

partial RP 26 / 55 MC: 7 BSCG 21 / 51 MC: 2 ASCG 27 / 38 MC: 2
Location: 2287..3096

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 269.0
  • Bit_score: 415
  • Evalue 4.80e-113
tRNA pseudouridine synthase A n=1 Tax=uncultured archaeon RepID=Q2VP68_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 269.0
  • Bit_score: 336
  • Evalue 2.00e-89
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 265.0
  • Bit_score: 292
  • Evalue 1.20e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 810
ATGCGAATCGCCCTCAAAGTTGCCTACATCGGCACCGATTATCACGGGTTTCAGGTGCAGCCAGACCAAAAAACAGTAGAAGGCGAACTCTTAAGGACTCTTTTGGAATTAAATATTATCAACGATCGCCGTGAAGCCAACTATATCGCAGCGGGGCGGACTGATAAAGGCGTTCATGCCCTTGGGCAGGTGGTAGCATTCGATACAGACAATCCCGAAGTGGCACAACCCAGGGCTATTAACAGCAGGCTTCCTGCAACGATATGGACATGGGCAAGAGCGGAAGCTCCATCCGGCTTTGACCCGCGCCGTGATGCCCTGAACCGGGAATACAGGTATATCATGTGCGGAAAATACAGCATCTCATCCCTCCGCAGCGCTTCAAAACTTTTAAAAGGGACGCATGATTTCTCAAATTTCGCCACGCCTGATAAAGAAAGAACAAATACATGCAAAATCGAAAAAATAAAGATTCAGGCTTATCGGGAATTCACAATCATGGATATCAGGGCGAACTATTTTCTCTGGCACATGGTCAGGAAAATCGCAACCGCAATGAAAATGGTAGGCTGCGGTGCAAGGGATATTTCATGGCTTGAACAGATGCTTCTTCCCTCAGAATTCACAGAGGGGCTTGAACCTGCTCCCGCATACGGTCTTATTTTGAAAAACGTGGAATACGAAAACGTCGCCTGGACAGAAGATACATACACTAAAAAAATAATATCAGAAAGACTTGAGGAACAATTTTTATGGCATGGTGTCATGGCAGAAATGCTAAGGGAATTAAAGGAAAGCTTCACAGTATAG
PROTEIN sequence
Length: 270
MRIALKVAYIGTDYHGFQVQPDQKTVEGELLRTLLELNIINDRREANYIAAGRTDKGVHALGQVVAFDTDNPEVAQPRAINSRLPATIWTWARAEAPSGFDPRRDALNREYRYIMCGKYSISSLRSASKLLKGTHDFSNFATPDKERTNTCKIEKIKIQAYREFTIMDIRANYFLWHMVRKIATAMKMVGCGARDISWLEQMLLPSEFTEGLEPAPAYGLILKNVEYENVAWTEDTYTKKIISERLEEQFLWHGVMAEMLRELKESFTV*