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SR-VP_26_10_2019_2_100cm_scaffold_4749_9

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_43_60

partial RP 26 / 55 MC: 7 BSCG 21 / 51 MC: 2 ASCG 27 / 38 MC: 2
Location: 6887..7528

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=RL1_METBU similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 213.0
  • Bit_score: 280
  • Evalue 7.90e-73
rpl1P; 50S ribosomal protein L1P similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 213.0
  • Bit_score: 280
  • Evalue 2.20e-73
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 213.0
  • Bit_score: 378
  • Evalue 3.90e-102

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Taxonomy

RBG_16_Euryarchaeota_41_19_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 642
TTGGAACAAGAAAAGATATTAGAAGCTGTAAAACAGGCGCTCGAAAAATCGCCAGAACGTAAATTTTCTGAAAGCGTTGACATTGCTATCAACCTCAAAAACCTTGATATGAATCAGCCTACGAACAGGCTTGATGAAGAGATAATCCTGCCAAACGGTCTGGGAAGACCTATAAAAATCGCGGTGTTCGCAAAAGGTGAGACCGCACAGAGGGCAAAAGGCGCAGGTGCTGATTATGTTTTCGACCCCGATGAAATCGCAGTTCTCGGAGACGATAAATCACGCACAAAAGCCCTGGCAGAAGAAGTCAATTTCTTCATAGCAGAAGCTGCCTTCATGCCTGCAATCGGTAAAACCCTTGGCCAGGTGCTCGGTCCGCGGGGAAAAATGCCCATACCCCTTACACCTGATAAAGATGTTGTGCAGATAATCAATAAGTCAAGGAATTCCATCAAATTAAGGTCCAAGGACAAAATGACCTTCCACATTTCAGTGGGGAAAAAAGAAATGGAGCCGCAGAAACTTGCACAGAATATCGAAGCCATAATAAACCGCATCGAACACAGATACGAACGCGGTTTGTATAATGTAAAATCCATTTACGTCAAATCCACTATGGGTCCTTCAGTGAGGGTGGTATAA
PROTEIN sequence
Length: 214
LEQEKILEAVKQALEKSPERKFSESVDIAINLKNLDMNQPTNRLDEEIILPNGLGRPIKIAVFAKGETAQRAKGAGADYVFDPDEIAVLGDDKSRTKALAEEVNFFIAEAAFMPAIGKTLGQVLGPRGKMPIPLTPDKDVVQIINKSRNSIKLRSKDKMTFHISVGKKEMEPQKLAQNIEAIINRIEHRYERGLYNVKSIYVKSTMGPSVRVV*