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SR-VP_26_10_2019_2_100cm_scaffold_13893_6

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_43_60

partial RP 26 / 55 MC: 7 BSCG 21 / 51 MC: 2 ASCG 27 / 38 MC: 2
Location: 4330..5532

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transport system permease protein (Homolog to LolDCE lipoprotein release factor) n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18EQ0_HALWD similarity UNIREF
DB: UNIREF100
  • Identity: 34.5
  • Coverage: 397.0
  • Bit_score: 259
  • Evalue 4.60e-66
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:KCZ72802.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 400.0
  • Bit_score: 446
  • Evalue 2.90e-122
lolE; ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 397.0
  • Bit_score: 259
  • Evalue 1.30e-66

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1203
ATGCTTGCAATAAGAAACCTGGCAAGAAACAAACTCAGGACAACCCTCACCATCATGGGAGTTGCACTTTCGGTCATCTCTATAATTCTTCTTGCTTCCATAGGCAACGGGCTTCTTACCACAGGGGGCAAAATCCTGGAGCAAAGCAGCATTCACCTGTGGGTAACAGGGACAGCTTCCGACCTCCAATCCCAATACATGGGAACGGCAGAGTCCAGGATAACAGATTCGCATAAATTTGCTGTAGAAATTAAGAAAAACAAGGTAATTGACATGGCAACACCTATGCTTACGGAAATGGTATATGCCTCCAAAAATAATTCTGAGCCGAAGGCGGTTTTCGCGCTAGGGTTAGAAGGTTCACAAGGGTCGATGGTGAACATCATCCAAGGCAGGGATTTAACCAGTGATGTGCATTATAATAAAGGCAGGTATGACGGCAAATGGAGAAATGAGGTGCTAATAGACAGCAGAACCGCCAGTCTTCTTAACGTTAAAGTCGGGGATACCATTCACATAGGTAAAACGGTAACCGAGGCAAAGGCACAGAATTTCACAATAATCGGTTTAACAAATTCTCTTTCCAAGTTCAGCTCCAATCCAATGGTCATTATGTACCTGTCCGAATTGCAGGACATAACCGGAAATCAATATTACGACAGCGTGACCTTGATAATCATCCGCCTCGAAAACCCGGCCATGGCAGCAGATATCCAGAAAGAATTACAGCAAAAATACCCCCAATATACTGTCAGCACGAACCAGGAATACCTGAAAAAGGCGTTAAAGGAAAACAGCTTGCCTTTAGCCAGCGCAGGTTCTATCGTAGTTCTTGCAGTGATTATGGGAACAATGCTGGCTATAAACACTATGCTCCTCAGCCTCAACGAGAAAAAGAAAGAGATAGCTATCCTCAGCGTGATGGGTTTAAGCCGCTGGTCAATATTCAAAAGCATAGGAACTGAAGGACTCCTGGCAAGCCTTGCAGGCGGTGCATTGGGCGCACTCATAAGCCTGCCCCTGACTCAGATATTAAATACTGTAATTTATGCTTACATAGGATTCAACGGATTGGTAATATTGCAACCGGAATACCTTTATATGGGGCTTGTCATCGCCCTGATAATAGGGATACTGACCATCTTTTTTGCTGCAATGCATATAAGCCGCATGAATACTGCAGAATTACTAAAAGGAGTATAA
PROTEIN sequence
Length: 401
MLAIRNLARNKLRTTLTIMGVALSVISIILLASIGNGLLTTGGKILEQSSIHLWVTGTASDLQSQYMGTAESRITDSHKFAVEIKKNKVIDMATPMLTEMVYASKNNSEPKAVFALGLEGSQGSMVNIIQGRDLTSDVHYNKGRYDGKWRNEVLIDSRTASLLNVKVGDTIHIGKTVTEAKAQNFTIIGLTNSLSKFSSNPMVIMYLSELQDITGNQYYDSVTLIIIRLENPAMAADIQKELQQKYPQYTVSTNQEYLKKALKENSLPLASAGSIVVLAVIMGTMLAINTMLLSLNEKKKEIAILSVMGLSRWSIFKSIGTEGLLASLAGGALGALISLPLTQILNTVIYAYIGFNGLVILQPEYLYMGLVIALIIGILTIFFAAMHISRMNTAELLKGV*