ggKbase home page

SR-VP_26_10_2019_2_90cm_scaffold_8766_2

Organism: SR-VP_26_10_2019_2_90cm_Methanoperedens_44_8

partial RP 10 / 55 BSCG 4 / 51 ASCG 3 / 38 MC: 1
Location: 1376..2641

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 421.0
  • Bit_score: 724
  • Evalue 5.80e-206
Phosphomethylpyrimidine synthase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E727_METEZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 422.0
  • Bit_score: 593
  • Evalue 1.10e-166
thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 422.0
  • Bit_score: 593
  • Evalue 3.10e-167

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1266
ATGACCACATTGATGGAGCAGGCGCATGCAGGTCTTGTGACATCGGAGATTAAACGTGTTGCTGCAAATGAGGGGGTAAACGCAGACACGGTCCGGAAGCTCCTTGCTCAGGGGCTGCTAGTCATCCCGAAGAATAATAAAAGCAGATCACTTCCAGTCGGCATAGGAAAACTGATGCGGACAAAGATCAACGCAAATCTTGGCACTTCAAGGGATTACGCGGATATCGATGCAGAGGTGGAGAAGGCAAAAACCGCTGAAAAATACGGCGCCGATACCATAATGGACTTATCCACGGGCGGAGACCTTGACCTTGTGCGCAAGCGTATTATGGATGCTGTCAGTGTCCCGGTAGGTTCCGTTCCGATATACCAGGCAGCAAGCCAGGGTATCGAGAATATGACCTCCGATGATATGTTCAATGCCGTAAGAAAGCATGCTGAAGACGGCATTGATTTTATCACAGTGCATGCGGGGGTGACCCGAAGTTCATTCGAGCGCCTGAAAAACAGTGAAAGGATACTCGATGTGGTCAGCCGTGGAGGTGCGTTCACTATATCATGGATGGAGCACAACGGCAAGGAGAACCCGTTTTATTCAGAATATGATTACCTGCTTGAGATTGCACGAGAATACGACCTCACACTCAGCCTTGGTGACGGCATGCGCCCCGGGTGTATCAACGATGCTTCGGACAGGGCGAAGTTCCAGGAGTTCATTACCCTTGGCGAGCTTGTGAAAAGGGCGCGGGCGGCTGGCATCCAGACTCTTGTAGAAGGCCCGGGGCATGTCCCGATAGATGAGATCGGGCTTTCGGTGAGCGCGATGAAGCACCTGACAGGAAACGCCCCGCTCTATCTTCTCGGCCCGCTTGTTACCGATATCGCGCCGGGGTACGACCATATCACAGCCGCGATAGGCGGGGCTGTGGCCGGGATGCACGGCGCGGACTTCCTGTGCATGACAACGCCTTCCGAACATCTGGCTCTGCCGAATGTCGAGGACATCAAGGAAGGCGCGATAGTAACGAGAATAGCTGCACATGCAGCCGACCTCGTGAAAGAAGGCGTTCGCGAGAGGGCGCGCGCCTTTGACCGCGAGATGGCGCTGGCTCGGCGTGATTTGGACTGGAACAGGCAGTTCGGACTTGCCATTGACAGCGAGAAAGCGCGGGAGATCCATGTAAGAAGTAAGAATGTTGATACGTGCAGCATGTGCGGGGAGTTGTGCTCGATTAAGATGATGCGGGATGTGATGAAAAAATAA
PROTEIN sequence
Length: 422
MTTLMEQAHAGLVTSEIKRVAANEGVNADTVRKLLAQGLLVIPKNNKSRSLPVGIGKLMRTKINANLGTSRDYADIDAEVEKAKTAEKYGADTIMDLSTGGDLDLVRKRIMDAVSVPVGSVPIYQAASQGIENMTSDDMFNAVRKHAEDGIDFITVHAGVTRSSFERLKNSERILDVVSRGGAFTISWMEHNGKENPFYSEYDYLLEIAREYDLTLSLGDGMRPGCINDASDRAKFQEFITLGELVKRARAAGIQTLVEGPGHVPIDEIGLSVSAMKHLTGNAPLYLLGPLVTDIAPGYDHITAAIGGAVAGMHGADFLCMTTPSEHLALPNVEDIKEGAIVTRIAAHAADLVKEGVRERARAFDREMALARRDLDWNRQFGLAIDSEKAREIHVRSKNVDTCSMCGELCSIKMMRDVMKK*