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MPF_scaffold_319_15

Organism: MPF_Caldanaerobacter_subterraneus_38_43

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 MC: 1 ASCG 14 / 38
Location: 15705..16205

Top 3 Functional Annotations

Value Algorithm Source
RpoE7; RNA polymerase sigma factor SigX KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 166.0
  • Bit_score: 327
  • Evalue 1.60e-87
  • rbh
RNA polymerase sigma factor SigX {ECO:0000313|EMBL:KKC28744.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cal UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 166.0
  • Bit_score: 327
  • Evalue 8.10e-87
DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 328
  • Evalue 8.20e-88

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Taxonomy

Caldanaerobacter subterraneus → Caldanaerobacter → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 501
GTGTTAAAAATAGAGGAGAGTTTCAAAGATATCTTTGAAAGGTATTATCCAAAAGTCTTAAAACAAATCTCCTGGGTTGTAAAAGATGAATTTAAAGCAGAGGATATTGCGCAGGAGGTATTCATAAAGTTCTTAAAAAAGCCTCCCCGGCACAATGAAAATATAGGAGGTTGGCTTTCAAAAGTGGCCATGAACCATGCATTAAACTATCTTCGAACAGAAAGAAGCGCAAGAGTAAGAGAAATAGAAGCCTTCCAGCAGAATGAAGAAAAACTTTTGGAAGACCCCGAAGAAATAGCTATAAAGAACTTTGAAAAGTCAAAGGTGAAAGAAGTTCTATTAAAAATGAACAAAAGAGACATGATGTGTTTAATACTTAAGCATTCAGGTTACAGTTATGAAGAAATAGCAGTCGCTTTGGGAATTAAAAAATCCTCCGTAGGAACAACCATTGCAAGAGCTCAGAAAAAATTCAAGGAATTATACGAAAAGGAGGTGTGA
PROTEIN sequence
Length: 167
VLKIEESFKDIFERYYPKVLKQISWVVKDEFKAEDIAQEVFIKFLKKPPRHNENIGGWLSKVAMNHALNYLRTERSARVREIEAFQQNEEKLLEDPEEIAIKNFEKSKVKEVLLKMNKRDMMCLILKHSGYSYEEIAVALGIKKSSVGTTIARAQKKFKELYEKEV*